T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 48848..78320
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N5862_RS30175 (N5862_30165) | 44868..45224 | + | 357 | WP_019706019 | hypothetical protein | - |
| N5862_RS30180 (N5862_30170) | 45285..45497 | + | 213 | WP_019706020 | hypothetical protein | - |
| N5862_RS30185 (N5862_30175) | 45508..45732 | + | 225 | WP_014343499 | hypothetical protein | - |
| N5862_RS30190 (N5862_30180) | 45813..46133 | + | 321 | WP_004152720 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| N5862_RS30195 (N5862_30185) | 46123..46401 | + | 279 | WP_020801586 | helix-turn-helix transcriptional regulator | - |
| N5862_RS30200 (N5862_30190) | 46402..46803 | + | 402 | WP_015065522 | helix-turn-helix domain-containing protein | - |
| N5862_RS30205 (N5862_30195) | 47632..48453 | + | 822 | WP_181713205 | DUF932 domain-containing protein | - |
| N5862_RS30210 (N5862_30200) | 48486..48815 | + | 330 | WP_011977736 | DUF5983 family protein | - |
| N5862_RS30215 (N5862_30205) | 48848..49333 | - | 486 | WP_001568108 | transglycosylase SLT domain-containing protein | virB1 |
| N5862_RS30220 (N5862_30210) | 49765..50157 | + | 393 | WP_004194114 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| N5862_RS30225 (N5862_30215) | 50387..51088 | + | 702 | WP_004194113 | hypothetical protein | - |
| N5862_RS30230 (N5862_30220) | 51174..51374 | + | 201 | WP_004194116 | TraY domain-containing protein | - |
| N5862_RS30235 (N5862_30225) | 51443..51811 | + | 369 | WP_004194426 | type IV conjugative transfer system pilin TraA | - |
| N5862_RS30240 (N5862_30230) | 51825..52130 | + | 306 | WP_004144424 | type IV conjugative transfer system protein TraL | traL |
| N5862_RS30245 (N5862_30235) | 52150..52716 | + | 567 | WP_118860656 | type IV conjugative transfer system protein TraE | traE |
| N5862_RS30250 (N5862_30240) | 52703..53443 | + | 741 | WP_118860657 | type-F conjugative transfer system secretin TraK | traK |
| N5862_RS30255 (N5862_30245) | 53443..54867 | + | 1425 | WP_004194260 | F-type conjugal transfer pilus assembly protein TraB | traB |
| N5862_RS30260 (N5862_30250) | 54981..55565 | + | 585 | WP_181713206 | type IV conjugative transfer system lipoprotein TraV | traV |
| N5862_RS30265 (N5862_30255) | 55697..56107 | + | 411 | WP_009309869 | hypothetical protein | - |
| N5862_RS30270 (N5862_30260) | 56172..57140 | - | 969 | WP_023279773 | IS5 family transposase | - |
| N5862_RS30275 (N5862_30265) | 57279..57497 | + | 219 | WP_015344987 | hypothetical protein | - |
| N5862_RS30280 (N5862_30270) | 57498..57809 | + | 312 | WP_015344986 | hypothetical protein | - |
| N5862_RS30285 (N5862_30275) | 57876..58280 | + | 405 | WP_004197817 | hypothetical protein | - |
| N5862_RS30290 (N5862_30280) | 58656..59054 | + | 399 | WP_013609531 | hypothetical protein | - |
| N5862_RS30295 (N5862_30285) | 59126..61765 | + | 2640 | WP_013023824 | type IV secretion system protein TraC | virb4 |
| N5862_RS30300 (N5862_30290) | 61765..62154 | + | 390 | WP_004197815 | type-F conjugative transfer system protein TrbI | - |
| N5862_RS30305 (N5862_30295) | 62154..62780 | + | 627 | WP_004152590 | type-F conjugative transfer system protein TraW | traW |
| N5862_RS30310 (N5862_30300) | 62824..63783 | + | 960 | WP_015065634 | conjugal transfer pilus assembly protein TraU | traU |
| N5862_RS30315 (N5862_30305) | 63796..64434 | + | 639 | WP_011977786 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| N5862_RS30320 (N5862_30310) | 64493..66448 | + | 1956 | WP_013023827 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| N5862_RS30325 (N5862_30315) | 66480..66734 | + | 255 | WP_004152674 | conjugal transfer protein TrbE | - |
| N5862_RS30330 (N5862_30320) | 66712..66960 | + | 249 | WP_004152675 | hypothetical protein | - |
| N5862_RS30335 (N5862_30325) | 66973..67299 | + | 327 | WP_004152676 | hypothetical protein | - |
| N5862_RS30340 (N5862_30330) | 67320..68072 | + | 753 | WP_004152677 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| N5862_RS30345 (N5862_30335) | 68083..68322 | + | 240 | WP_004144400 | type-F conjugative transfer system pilin chaperone TraQ | - |
| N5862_RS30350 (N5862_30340) | 68294..68851 | + | 558 | WP_013214031 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| N5862_RS30355 (N5862_30345) | 68897..69340 | + | 444 | WP_013023828 | F-type conjugal transfer protein TrbF | - |
| N5862_RS30360 (N5862_30350) | 69318..70697 | + | 1380 | WP_014343487 | conjugal transfer pilus assembly protein TraH | traH |
| N5862_RS30365 (N5862_30355) | 70697..73546 | + | 2850 | WP_013609534 | conjugal transfer mating-pair stabilization protein TraG | traG |
| N5862_RS30370 (N5862_30360) | 73549..74082 | + | 534 | WP_014343486 | conjugal transfer protein TraS | - |
| N5862_RS30375 (N5862_30365) | 74268..74999 | + | 732 | WP_013023830 | conjugal transfer complement resistance protein TraT | - |
| N5862_RS30380 (N5862_30370) | 75192..75881 | + | 690 | WP_013023831 | hypothetical protein | - |
| N5862_RS30385 (N5862_30375) | 76008..78320 | + | 2313 | WP_118842585 | type IV conjugative transfer system coupling protein TraD | virb4 |