T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 5545..29619
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AGF18_RS28820 (AGF18_28820) | 5545..7791 | - | 2247 | WP_000056180 | type IV conjugative transfer system coupling protein TraD | virb4 |
| AGF18_RS28825 (AGF18_28825) | 7942..8679 | - | 738 | WP_000682257 | conjugal transfer complement resistance protein TraT | - |
| AGF18_RS28830 (AGF18_28830) | 8855..9415 | - | 561 | WP_000830402 | hypothetical protein | - |
| AGF18_RS28835 (AGF18_28835) | 9427..12324 | - | 2898 | WP_000257544 | conjugal transfer mating-pair stabilization protein TraG | traG |
| AGF18_RS28840 (AGF18_28840) | 12326..13687 | - | 1362 | WP_001237460 | conjugal transfer pilus assembly protein TraH | traH |
| AGF18_RS28845 (AGF18_28845) | 13687..14298 | - | 612 | WP_000958503 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| AGF18_RS28850 (AGF18_28850) | 14324..15100 | - | 777 | WP_001203361 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| AGF18_RS28855 (AGF18_28855) | 15097..16950 | - | 1854 | WP_000683618 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| AGF18_RS28860 (AGF18_28860) | 16947..17561 | - | 615 | WP_000832511 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| AGF18_RS28865 (AGF18_28865) | 17558..17917 | - | 360 | WP_000961331 | hypothetical protein | - |
| AGF18_RS28870 (AGF18_28870) | 17928..18923 | - | 996 | WP_000833231 | conjugal transfer pilus assembly protein TraU | traU |
| AGF18_RS28875 (AGF18_28875) | 18920..19555 | - | 636 | WP_000715590 | type-F conjugative transfer system protein TraW | traW |
| AGF18_RS28880 (AGF18_28880) | 19555..20019 | - | 465 | WP_003830754 | type-F conjugative transfer system protein TrbI | - |
| AGF18_RS28885 (AGF18_28885) | 20016..22607 | - | 2592 | WP_000714154 | type IV secretion system protein TraC | virb4 |
| AGF18_RS32345 | 22618..23232 | - | 615 | WP_000724456 | type IV conjugative transfer system lipoprotein TraV | traV |
| AGF18_RS28890 (AGF18_28890) | 23343..23567 | - | 225 | WP_000786061 | TraR/DksA C4-type zinc finger protein | - |
| AGF18_RS28895 (AGF18_28895) | 23678..25039 | - | 1362 | WP_000024509 | F-type conjugal transfer pilus assembly protein TraB | traB |
| AGF18_RS28900 (AGF18_28900) | 25026..25766 | - | 741 | WP_000794569 | type-F conjugative transfer system secretin TraK | traK |
| AGF18_RS28905 (AGF18_28905) | 25756..26319 | - | 564 | WP_000406022 | type IV conjugative transfer system protein TraE | traE |
| AGF18_RS28910 (AGF18_28910) | 26339..26644 | - | 306 | WP_000398849 | type IV conjugative transfer system protein TraL | traL |
| AGF18_RS28915 (AGF18_28915) | 26646..27005 | - | 360 | WP_001054221 | type IV conjugative transfer system pilin TraA | - |
| AGF18_RS28920 (AGF18_28920) | 27122..27355 | - | 234 | WP_000662610 | TraY domain-containing protein | - |
| AGF18_RS28925 (AGF18_28925) | 27562..28011 | - | 450 | WP_001144045 | helix-turn-helix domain-containing protein | - |
| AGF18_RS28930 (AGF18_28930) | 28312..28695 | - | 384 | WP_001124390 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| AGF18_RS28935 (AGF18_28935) | 29164..29619 | + | 456 | WP_001232722 | transglycosylase SLT domain-containing protein | virB1 |
| AGF18_RS28940 (AGF18_28940) | 29630..30216 | - | 587 | Protein_27 | antirestriction protein | - |
| AGF18_RS28945 (AGF18_28945) | 30807..31640 | - | 834 | WP_000080851 | N-6 DNA methylase | - |
| AGF18_RS28950 (AGF18_28950) | 31687..31833 | - | 147 | WP_001159045 | hypothetical protein | - |
| AGF18_RS28955 (AGF18_28955) | 31928..32275 | - | 348 | WP_000550116 | hypothetical protein | - |
| AGF18_RS28960 (AGF18_28960) | 32332..32736 | - | 405 | WP_001096026 | hypothetical protein | - |
| AGF18_RS28965 (AGF18_28965) | 33462..33836 | - | 375 | WP_001271110 | hypothetical protein | - |
| AGF18_RS28970 (AGF18_28970) | 34191..34544 | - | 354 | WP_000872088 | hypothetical protein | - |