T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 18226..38073
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LQ152_RS25560 (AI3010V1_4871) | 14071..15504 | - | 1434 | WP_001288432 | DNA cytosine methyltransferase | - |
| LQ152_RS25565 (AI3010V1_4872) | 15603..15875 | + | 273 | Protein_18 | IS1 family transposase | - |
| LQ152_RS25570 | 15886..16092 | - | 207 | WP_001749967 | hypothetical protein | - |
| LQ152_RS25575 (AI3010V1_4873) | 16097..16744 | - | 648 | WP_015344958 | restriction endonuclease | - |
| LQ152_RS25580 (AI3010V1_4874) | 16794..17027 | - | 234 | WP_001191790 | hypothetical protein | - |
| LQ152_RS25585 (AI3010V1_4875) | 17141..17455 | - | 315 | WP_001749965 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| LQ152_RS25590 | 17452..17796 | - | 345 | WP_001749964 | hypothetical protein | - |
| LQ152_RS25595 | 17812..18183 | - | 372 | WP_011867773 | H-NS family nucleoid-associated regulatory protein | - |
| LQ152_RS25600 (AI3010V1_4877) | 18226..18960 | + | 735 | WP_001749963 | lytic transglycosylase domain-containing protein | virB1 |
| LQ152_RS25605 (AI3010V1_4878) | 18969..19250 | + | 282 | WP_000440698 | transcriptional repressor KorA | - |
| LQ152_RS25610 (AI3010V1_4879) | 19260..19553 | + | 294 | WP_001749962 | hypothetical protein | virB2 |
| LQ152_RS25615 (AI3010V1_4880) | 19603..19920 | + | 318 | WP_000496058 | VirB3 family type IV secretion system protein | virB3 |
| LQ152_RS25620 (AI3010V1_4881) | 19920..22520 | + | 2601 | WP_001749961 | VirB4 family type IV secretion/conjugal transfer ATPase | virb4 |
| LQ152_RS25625 (AI3010V1_4882) | 22538..23251 | + | 714 | WP_001749960 | type IV secretion system protein | virB5 |
| LQ152_RS25630 (AI3010V1_4883) | 23259..23486 | + | 228 | WP_001749959 | IncN-type entry exclusion lipoprotein EexN | - |
| LQ152_RS25635 (AI3010V1_4884) | 23502..24542 | + | 1041 | WP_001749958 | type IV secretion system protein | virB6 |
| LQ152_RS25925 | 24643..24771 | + | 129 | WP_071882546 | conjugal transfer protein TraN | - |
| LQ152_RS25640 (AI3010V1_4885) | 24761..25459 | + | 699 | WP_000646594 | type IV secretion system protein | virB8 |
| LQ152_RS25645 (AI3010V1_4886) | 25470..26354 | + | 885 | WP_000735066 | TrbG/VirB9 family P-type conjugative transfer protein | virB9 |
| LQ152_RS25650 (AI3010V1_4887) | 26354..27514 | + | 1161 | WP_000101710 | type IV secretion system protein VirB10 | virB10 |
| LQ152_RS25655 (AI3010V1_4888) | 27556..28551 | + | 996 | WP_000128596 | ATPase, T2SS/T4P/T4SS family | virB11 |
| LQ152_RS25660 (AI3010V1_4889) | 28551..29084 | + | 534 | WP_000792636 | phospholipase D family protein | - |
| LQ152_RS25930 (AI3010V1_4890) | 29258..29710 | - | 453 | WP_001749956 | DUF6710 family protein | - |
| LQ152_RS25670 | 30021..30262 | + | 242 | Protein_40 | relaxase | - |
| LQ152_RS25675 (AI3010V1_4892) | 30294..30944 | - | 651 | WP_000164043 | tetracycline resistance transcriptional repressor TetR(A) | - |
| LQ152_RS25680 (AI3010V1_4893) | 31050..32249 | + | 1200 | WP_012579085 | tetracycline efflux MFS transporter Tet(A) | - |
| LQ152_RS25685 (AI3010V1_4894) | 32281..32934 | - | 654 | Protein_43 | EamA family transporter | - |
| LQ152_RS25690 (AI3010V1_4895) | 33129..33302 | - | 174 | WP_001749978 | hypothetical protein | - |
| LQ152_RS25695 (AI3010V1_4896) | 33302..36544 | - | 3243 | WP_001749977 | MobF family relaxase | - |
| LQ152_RS25700 (AI3010V1_4897) | 36544..38073 | - | 1530 | WP_001749976 | type IV secretion system DNA-binding domain-containing protein | virb4 |
| LQ152_RS25705 | 38075..38491 | - | 417 | WP_001749975 | hypothetical protein | - |
| LQ152_RS25710 (AI3010V1_4899) | 38982..39401 | + | 420 | WP_001749974 | plasmid stabilization protein StbA | - |
| LQ152_RS25715 (AI3010V1_4900) | 39410..40126 | + | 717 | WP_001749973 | StbB family protein | - |
| LQ152_RS25720 (AI3010V1_4901) | 40128..40496 | + | 369 | WP_000414913 | plasmid stabilization protein StbC | - |
| LQ152_RS25725 (AI3010V1_4902) | 40678..41022 | + | 345 | WP_000999874 | hypothetical protein | - |
| LQ152_RS25730 (AI3010V1_4903) | 41133..41453 | - | 321 | WP_001749971 | protein CcgAII | - |
| LQ152_RS25735 (AI3010V1_4904) | 41508..41687 | - | 180 | WP_000214483 | protein CcgAI | - |
| LQ152_RS25740 (AI3010V1_4905) | 42414..42923 | - | 510 | WP_000129958 | antirestriction protein ArdA | - |