T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 48213..71685
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SEETRA13_RS25945 | 43725..43853 | + | 129 | WP_000372429 | hypothetical protein | - |
| SEETRA13_RS25680 | 43939..44097 | + | 159 | WP_001704449 | hypothetical protein | - |
| SEETRA13_RS25685 | 44200..45018 | + | 819 | Protein_57 | DUF932 domain-containing protein | - |
| SEETRA13_RS23580 (SEETRA13_023580) | 45329..45799 | - | 471 | WP_014344446 | transglycosylase SLT domain-containing protein | - |
| SEETRA13_RS23585 (SEETRA13_023585) | 46214..46594 | + | 381 | WP_001151546 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| SEETRA13_RS23590 (SEETRA13_023590) | 46787..47473 | + | 687 | WP_000336297 | PAS domain-containing protein | - |
| SEETRA13_RS25445 | 47567..47794 | + | 228 | WP_001676655 | conjugal transfer relaxosome protein TraY | - |
| SEETRA13_RS23595 (SEETRA13_023595) | 47836..48198 | + | 363 | WP_001274201 | type IV conjugative transfer system pilin TraA | - |
| SEETRA13_RS23600 (SEETRA13_023600) | 48213..48524 | + | 312 | WP_000012129 | type IV conjugative transfer system protein TraL | traL |
| SEETRA13_RS23605 (SEETRA13_023605) | 48546..49112 | + | 567 | WP_000399768 | type IV conjugative transfer system protein TraE | traE |
| SEETRA13_RS23610 (SEETRA13_023610) | 49099..49839 | + | 741 | WP_001230719 | type-F conjugative transfer system secretin TraK | traK |
| SEETRA13_RS23615 (SEETRA13_023615) | 49839..51260 | + | 1422 | WP_000146700 | F-type conjugal transfer pilus assembly protein TraB | traB |
| SEETRA13_RS23620 (SEETRA13_023620) | 51250..51846 | + | 597 | WP_000527896 | conjugal transfer pilus-stabilizing protein TraP | - |
| SEETRA13_RS23625 (SEETRA13_023625) | 51824..52069 | + | 246 | WP_010999944 | DUF2689 domain-containing protein | virb4 |
| SEETRA13_RS23630 (SEETRA13_023630) | 52066..52581 | + | 516 | WP_001079995 | type IV conjugative transfer system lipoprotein TraV | traV |
| SEETRA13_RS23635 (SEETRA13_023635) | 52716..52937 | + | 222 | WP_001278699 | conjugal transfer protein TraR | - |
| SEETRA13_RS23640 (SEETRA13_023640) | 52930..53397 | + | 468 | WP_023198173 | conjugative transfer protein | - |
| SEETRA13_RS23645 (SEETRA13_023645) | 53514..53777 | + | 264 | WP_001239255 | hypothetical protein | - |
| SEETRA13_RS23650 (SEETRA13_023650) | 53793..56441 | + | 2649 | WP_000793310 | type IV secretion system protein TraC | virb4 |
| SEETRA13_RS23655 (SEETRA13_023655) | 56416..56802 | + | 387 | WP_000105164 | type-F conjugative transfer system protein TrbI | - |
| SEETRA13_RS23660 (SEETRA13_023660) | 56799..57431 | + | 633 | WP_023139304 | type-F conjugative transfer system protein TraW | traW |
| SEETRA13_RS23665 (SEETRA13_023665) | 57428..58420 | + | 993 | WP_023198135 | conjugal transfer pilus assembly protein TraU | traU |
| SEETRA13_RS23670 (SEETRA13_023670) | 58439..58747 | + | 309 | WP_010999945 | hypothetical protein | - |
| SEETRA13_RS23675 (SEETRA13_023675) | 58732..59370 | + | 639 | WP_000554823 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| SEETRA13_RS23680 (SEETRA13_023680) | 59407..59826 | + | 420 | WP_001229397 | HNH endonuclease signature motif containing protein | - |
| SEETRA13_RS23685 (SEETRA13_023685) | 59823..61649 | + | 1827 | WP_023198136 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| SEETRA13_RS23690 (SEETRA13_023690) | 61660..61875 | + | 216 | WP_000700023 | conjugal transfer protein TrbE | - |
| SEETRA13_RS23695 (SEETRA13_023695) | 61887..62636 | + | 750 | WP_001226854 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| SEETRA13_RS23700 (SEETRA13_023700) | 62850..63143 | + | 294 | WP_001233881 | type-F conjugative transfer system pilin chaperone TraQ | - |
| SEETRA13_RS23705 (SEETRA13_023705) | 63130..63678 | + | 549 | WP_000055840 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| SEETRA13_RS23710 (SEETRA13_023710) | 63668..65050 | + | 1383 | WP_001161719 | conjugal transfer pilus assembly protein TraH | traH |
| SEETRA13_RS23715 (SEETRA13_023715) | 65047..67869 | + | 2823 | WP_001007086 | conjugal transfer mating-pair stabilization protein TraG | traG |
| SEETRA13_RS23720 (SEETRA13_023720) | 67885..68379 | + | 495 | WP_010999946 | entry exclusion protein | - |
| SEETRA13_RS23725 (SEETRA13_023725) | 68415..69146 | + | 732 | WP_000782438 | conjugal transfer complement resistance protein TraT | - |
| SEETRA13_RS23730 (SEETRA13_023730) | 69523..71685 | + | 2163 | WP_000009318 | type IV conjugative transfer system coupling protein TraD | virb4 |
| SEETRA13_RS23735 (SEETRA13_023735) | 71694..72092 | - | 399 | WP_000911322 | type II toxin-antitoxin system VapC family toxin | - |
| SEETRA13_RS23740 (SEETRA13_023740) | 72092..72319 | - | 228 | WP_000450265 | toxin-antitoxin system antitoxin VapB | - |