T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 65233..94230
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NBX86_RS27855 (AFEHPNKK_05391) | 65233..67545 | - | 2313 | WP_032495268 | type IV conjugative transfer system coupling protein TraD | virb4 |
| NBX86_RS27860 (AFEHPNKK_05392) | 67674..68363 | - | 690 | WP_004198206 | hypothetical protein | - |
| NBX86_RS27865 (AFEHPNKK_05393) | 68555..69286 | - | 732 | WP_004152622 | conjugal transfer complement resistance protein TraT | - |
| NBX86_RS27870 (AFEHPNKK_05394) | 69470..70018 | - | 549 | WP_004152623 | conjugal transfer entry exclusion protein TraS | - |
| NBX86_RS27875 (AFEHPNKK_05395) | 70031..72880 | - | 2850 | WP_004152624 | conjugal transfer mating-pair stabilization protein TraG | traG |
| NBX86_RS27880 (AFEHPNKK_05396) | 72880..74259 | - | 1380 | WP_004165169 | conjugal transfer pilus assembly protein TraH | traH |
| NBX86_RS27885 (AFEHPNKK_05397) | 74237..74680 | - | 444 | WP_004152679 | F-type conjugal transfer protein TrbF | - |
| NBX86_RS27890 (AFEHPNKK_05398) | 74726..75283 | - | 558 | WP_004152678 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| NBX86_RS27895 (AFEHPNKK_05399) | 75255..75494 | - | 240 | WP_004144400 | type-F conjugative transfer system pilin chaperone TraQ | - |
| NBX86_RS27900 (AFEHPNKK_05400) | 75505..76257 | - | 753 | WP_004152677 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| NBX86_RS27905 (AFEHPNKK_05401) | 76278..76604 | - | 327 | WP_004152676 | hypothetical protein | - |
| NBX86_RS27910 (AFEHPNKK_05402) | 76617..76865 | - | 249 | WP_004152675 | hypothetical protein | - |
| NBX86_RS27915 (AFEHPNKK_05403) | 76843..77097 | - | 255 | WP_004152674 | conjugal transfer protein TrbE | - |
| NBX86_RS27920 (AFEHPNKK_05404) | 77129..79084 | - | 1956 | WP_004152673 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| NBX86_RS27925 (AFEHPNKK_05405) | 79143..79781 | - | 639 | WP_004152672 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| NBX86_RS27930 (AFEHPNKK_05406) | 79794..80783 | - | 990 | WP_011977785 | conjugal transfer pilus assembly protein TraU | traU |
| NBX86_RS27935 (AFEHPNKK_05407) | 80780..81169 | - | 390 | WP_004152508 | hypothetical protein | - |
| NBX86_RS27940 (AFEHPNKK_05408) | 81211..81837 | - | 627 | WP_004152507 | type-F conjugative transfer system protein TraW | traW |
| NBX86_RS27945 (AFEHPNKK_05409) | 81837..82226 | - | 390 | WP_004152506 | type-F conjugative transfer system protein TrbI | - |
| NBX86_RS27950 (AFEHPNKK_05410) | 82226..84865 | - | 2640 | WP_004152505 | type IV secretion system protein TraC | virb4 |
| NBX86_RS27955 (AFEHPNKK_05411) | 84937..85335 | - | 399 | WP_011977783 | hypothetical protein | - |
| NBX86_RS27960 | 85343..85732 | - | 390 | WP_004153076 | hypothetical protein | - |
| NBX86_RS27965 (AFEHPNKK_05412) | 85775..86179 | - | 405 | WP_004152503 | hypothetical protein | - |
| NBX86_RS27970 (AFEHPNKK_05413) | 86246..86557 | - | 312 | WP_004152502 | hypothetical protein | - |
| NBX86_RS27975 (AFEHPNKK_05414) | 86558..86776 | - | 219 | WP_004152501 | hypothetical protein | - |
| NBX86_RS27980 (AFEHPNKK_05415) | 86882..87292 | - | 411 | WP_004152499 | hypothetical protein | - |
| NBX86_RS27985 (AFEHPNKK_05416) | 87424..88008 | - | 585 | WP_004161368 | type IV conjugative transfer system lipoprotein TraV | traV |
| NBX86_RS27990 (AFEHPNKK_05417) | 88122..89546 | - | 1425 | WP_004155033 | F-type conjugal transfer pilus assembly protein TraB | traB |
| NBX86_RS27995 (AFEHPNKK_05418) | 89546..90286 | - | 741 | WP_004152497 | type-F conjugative transfer system secretin TraK | traK |
| NBX86_RS28000 (AFEHPNKK_05419) | 90273..90839 | - | 567 | WP_004144423 | type IV conjugative transfer system protein TraE | traE |
| NBX86_RS28005 (AFEHPNKK_05420) | 90859..91164 | - | 306 | WP_004144424 | type IV conjugative transfer system protein TraL | traL |
| NBX86_RS28010 (AFEHPNKK_05421) | 91178..91546 | - | 369 | WP_004152496 | type IV conjugative transfer system pilin TraA | - |
| NBX86_RS28015 | 91600..91986 | - | 387 | WP_004152495 | TraY domain-containing protein | - |
| NBX86_RS28020 (AFEHPNKK_05422) | 92065..92751 | - | 687 | WP_004152494 | transcriptional regulator TraJ family protein | - |
| NBX86_RS28025 (AFEHPNKK_05423) | 92925..93323 | - | 399 | WP_004152493 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| NBX86_RS28030 (AFEHPNKK_05424) | 93745..94230 | + | 486 | WP_001568108 | transglycosylase SLT domain-containing protein | virB1 |
| NBX86_RS28035 | 94263..94592 | - | 330 | WP_011977736 | DUF5983 family protein | - |
| NBX86_RS28040 (AFEHPNKK_05425) | 94625..95446 | - | 822 | WP_004152492 | DUF932 domain-containing protein | - |
| NBX86_RS28045 (AFEHPNKK_05426) | 96266..97099 | - | 834 | WP_004152751 | N-6 DNA methylase | - |
| NBX86_RS28050 (AFEHPNKK_05427) | 97150..97296 | - | 147 | WP_004152750 | hypothetical protein | - |
| NBX86_RS28055 (AFEHPNKK_05428) | 97391..97738 | - | 348 | WP_004152749 | hypothetical protein | - |
| NBX86_RS28060 (AFEHPNKK_05429) | 97795..98148 | - | 354 | WP_004152748 | hypothetical protein | - |
| NBX86_RS28065 (AFEHPNKK_05430) | 98778..99128 | - | 351 | WP_004153414 | hypothetical protein | - |