T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 488517..501655
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IE4872_RS24990 (IE4872_PC00507) | 486841..487347 | + | 507 | WP_237361948 | conjugative transfer signal peptidase TraF | - |
| IE4872_RS24995 (IE4872_PC00508) | 487337..488500 | + | 1164 | WP_074070973 | conjugal transfer protein TraB | - |
| IE4872_RS25000 (IE4872_PC00509) | 488517..489131 | + | 615 | WP_074070974 | TraH family protein | virB1 |
| IE4872_RS25005 (IE4872_PC00510) | 489152..489529 | - | 378 | WP_074070975 | DUF5615 family PIN-like protein | - |
| IE4872_RS25010 (IE4872_PC00511) | 489526..490158 | - | 633 | WP_074070976 | DUF433 domain-containing protein | - |
| IE4872_RS25015 (IE4872_PC00512) | 490318..490533 | - | 216 | WP_040114408 | helix-turn-helix transcriptional regulator | - |
| IE4872_RS25020 (IE4872_PC00513) | 490751..491074 | + | 324 | WP_074070977 | transcriptional repressor TraM | - |
| IE4872_RS25025 (IE4872_PC00514) | 491078..491782 | - | 705 | WP_074071031 | autoinducer binding domain-containing protein | - |
| IE4872_RS25030 (IE4872_PC00515) | 492137..493435 | - | 1299 | WP_074070978 | IncP-type conjugal transfer protein TrbI | virB10 |
| IE4872_RS25035 (IE4872_PC00516) | 493447..493884 | - | 438 | WP_074070979 | conjugal transfer protein TrbH | - |
| IE4872_RS25040 (IE4872_PC00517) | 493888..494700 | - | 813 | WP_074070980 | P-type conjugative transfer protein TrbG | virB9 |
| IE4872_RS25045 (IE4872_PC00518) | 494718..495380 | - | 663 | WP_074070981 | conjugal transfer protein TrbF | virB8 |
| IE4872_RS25050 (IE4872_PC00519) | 495399..496580 | - | 1182 | WP_074070982 | P-type conjugative transfer protein TrbL | virB6 |
| IE4872_RS25055 (IE4872_PC00520) | 496574..496774 | - | 201 | WP_074070983 | entry exclusion protein TrbK | - |
| IE4872_RS25060 (IE4872_PC00521) | 496771..497574 | - | 804 | WP_074070984 | P-type conjugative transfer protein TrbJ | virB5 |
| IE4872_RS25065 (IE4872_PC00522) | 497546..500002 | - | 2457 | WP_074070985 | conjugal transfer protein TrbE | virb4 |
| IE4872_RS25070 (IE4872_PC00523) | 500013..500312 | - | 300 | WP_074070986 | conjugal transfer protein TrbD | virB3 |
| IE4872_RS25075 (IE4872_PC00524) | 500305..500688 | - | 384 | WP_074070987 | TrbC/VirB2 family protein | virB2 |
| IE4872_RS25080 (IE4872_PC00525) | 500678..501655 | - | 978 | WP_074070988 | P-type conjugative transfer ATPase TrbB | virB11 |
| IE4872_RS25085 (IE4872_PC00526) | 501666..502289 | - | 624 | WP_074070989 | acyl-homoserine-lactone synthase TraI | - |
| IE4872_RS25090 (IE4872_PC00528) | 502611..503894 | + | 1284 | WP_074070990 | plasmid partitioning protein RepA | - |
| IE4872_RS25095 (IE4872_PC00529) | 503891..504922 | + | 1032 | WP_074070991 | plasmid partitioning protein RepB | - |
| IE4872_RS25100 (IE4872_PC00530) | 505117..506328 | + | 1212 | WP_074070992 | plasmid replication protein RepC | - |