T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 66111..93320
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A5956_RS00255 (A5956_24345) | 61269..61667 | + | 399 | WP_000911320 | type II toxin-antitoxin system VapC family toxin | - |
| A5956_RS00260 (A5956_24350) | 61676..63878 | - | 2203 | Protein_53 | type IV conjugative transfer system coupling protein TraD | - |
| A5956_RS00265 (A5956_24355) | 63934..64665 | - | 732 | WP_047643166 | hypothetical protein | - |
| A5956_RS00270 (A5956_24360) | 64841..65629 | - | 789 | WP_032327001 | hypothetical protein | - |
| A5956_RS00275 (A5956_24365) | 65797..66108 | + | 312 | WP_000522220 | heavy metal-binding domain-containing protein | - |
| A5956_RS00280 (A5956_24370) | 66111..68930 | - | 2820 | WP_032327002 | conjugal transfer mating-pair stabilization protein TraG | traG |
| A5956_RS00285 (A5956_24375) | 68927..70300 | - | 1374 | WP_000944332 | conjugal transfer pilus assembly protein TraH | traH |
| A5956_RS00290 (A5956_24380) | 70287..70679 | - | 393 | WP_032327004 | F-type conjugal transfer protein TrbF | - |
| A5956_RS00295 (A5956_24385) | 70660..71007 | - | 348 | WP_071532380 | P-type conjugative transfer protein TrbJ | - |
| A5956_RS00300 (A5956_24390) | 70937..71517 | - | 581 | Protein_61 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| A5956_RS00305 (A5956_24395) | 71504..71794 | - | 291 | WP_021521297 | type-F conjugative transfer system pilin chaperone TraQ | - |
| A5956_RS00310 (A5956_24400) | 72190..72531 | - | 342 | WP_000556797 | conjugal transfer protein TrbA | - |
| A5956_RS00315 (A5956_24405) | 72545..73288 | - | 744 | WP_001030373 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| A5956_RS00320 (A5956_24410) | 73281..73538 | - | 258 | WP_000864346 | conjugal transfer protein TrbE | - |
| A5956_RS00325 (A5956_24415) | 73552..75456 | - | 1905 | WP_050437107 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| A5956_RS00330 (A5956_24420) | 75550..75930 | - | 381 | WP_000056344 | hypothetical protein | - |
| A5956_RS00335 (A5956_24425) | 75927..76565 | - | 639 | WP_001035178 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| A5956_RS00340 (A5956_24430) | 76758..76997 | + | 240 | WP_001066128 | hypothetical protein | - |
| A5956_RS00345 (A5956_24435) | 76994..77173 | - | 180 | WP_000970212 | hypothetical protein | - |
| A5956_RS27030 | 77194..77318 | - | 125 | Protein_71 | TraU family protein | - |
| A5956_RS00350 (A5956_24440) | 77353..77799 | - | 447 | WP_001289131 | hypothetical protein | - |
| A5956_RS00360 (A5956_24450) | 78527..79069 | - | 543 | WP_032327006 | hypothetical protein | - |
| A5956_RS00365 (A5956_24455) | 79083..80075 | - | 993 | WP_000817328 | conjugal transfer pilus assembly protein TraU | traU |
| A5956_RS00370 (A5956_24460) | 80072..80704 | - | 633 | WP_001203739 | type-F conjugative transfer system protein TraW | traW |
| A5956_RS00375 (A5956_24465) | 80701..81087 | - | 387 | WP_000214101 | type-F conjugative transfer system protein TrbI | - |
| A5956_RS00380 (A5956_24470) | 81084..83714 | - | 2631 | WP_032327007 | type IV secretion system protein TraC | virb4 |
| A5956_RS27035 (A5956_24475) | 83839..84186 | - | 348 | WP_000836684 | hypothetical protein | - |
| A5956_RS27930 | 84214..84432 | - | 219 | WP_071528664 | hypothetical protein | - |
| A5956_RS00390 (A5956_24480) | 84512..84985 | - | 474 | WP_032327008 | hypothetical protein | - |
| A5956_RS00395 (A5956_24485) | 84996..85391 | - | 396 | WP_000549593 | hypothetical protein | - |
| A5956_RS00400 (A5956_24490) | 85384..85605 | - | 222 | WP_001278977 | conjugal transfer protein TraR | - |
| A5956_RS00405 (A5956_24495) | 85740..86255 | - | 516 | WP_000809868 | type IV conjugative transfer system lipoprotein TraV | traV |
| A5956_RS00410 (A5956_24500) | 86252..86503 | - | 252 | WP_001038341 | conjugal transfer protein TrbG | - |
| A5956_RS00415 (A5956_24505) | 86496..86816 | - | 321 | WP_032327009 | conjugal transfer protein TrbD | virb4 |
| A5956_RS00420 (A5956_24510) | 86803..87390 | - | 588 | WP_032327010 | conjugal transfer pilus-stabilizing protein TraP | - |
| A5956_RS00425 (A5956_24515) | 87380..88810 | - | 1431 | WP_000146622 | F-type conjugal transfer pilus assembly protein TraB | traB |
| A5956_RS00430 (A5956_24520) | 88810..89538 | - | 729 | WP_001365587 | type-F conjugative transfer system secretin TraK | traK |
| A5956_RS00435 (A5956_24525) | 89525..90091 | - | 567 | WP_000399759 | type IV conjugative transfer system protein TraE | traE |
| A5956_RS00440 (A5956_24530) | 90113..90424 | - | 312 | WP_000012099 | type IV conjugative transfer system protein TraL | traL |
| A5956_RS00445 (A5956_24535) | 90439..90792 | - | 354 | WP_028985883 | type IV conjugative transfer system pilin TraA | - |
| A5956_RS24835 | 90827..91054 | - | 228 | WP_024180943 | conjugal transfer relaxosome protein TraY | - |
| A5956_RS00450 (A5956_24540) | 91173..91820 | - | 648 | WP_000332526 | transcriptional regulator TraJ family protein | - |
| A5956_RS00455 (A5956_24545) | 92014..92397 | - | 384 | WP_001151535 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| A5956_RS00460 (A5956_24550) | 92673..93320 | + | 648 | WP_000602507 | transglycosylase SLT domain-containing protein | virB1 |
| A5956_RS00465 (A5956_24555) | 93616..94437 | - | 822 | WP_001234499 | DUF932 domain-containing protein | - |
| A5956_RS00470 (A5956_24560) | 94556..94843 | - | 288 | WP_000107543 | hypothetical protein | - |
| A5956_RS00475 (A5956_24565) | 95000..95302 | - | 303 | WP_001272236 | hypothetical protein | - |
| A5956_RS27935 | 95602..95775 | + | 174 | Protein_99 | hypothetical protein | - |
| A5956_RS00485 (A5956_24575) | 96229..96357 | - | 129 | WP_236922137 | type I toxin-antitoxin system Hok family toxin | - |
| A5956_RS27940 | 96296..96448 | - | 153 | Protein_101 | DUF5431 family protein | - |
| A5956_RS00495 (A5956_24585) | 96622..97384 | - | 763 | Protein_102 | plasmid SOS inhibition protein A | - |
| A5956_RS00500 (A5956_24590) | 97381..97815 | - | 435 | WP_032327046 | conjugation system SOS inhibitor PsiB | - |