T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 90197..116553
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LRM92_RS24410 (LRM92_24405) | 85353..87350 | + | 1998 | WP_000117513 | ParB/RepB/Spo0J family partition protein | - |
| LRM92_RS24415 (LRM92_24410) | 87390..87824 | + | 435 | WP_010999943 | conjugation system SOS inhibitor PsiB | - |
| LRM92_RS24420 (LRM92_24415) | 87821..88558 | + | 738 | WP_000581933 | plasmid SOS inhibition protein A | - |
| LRM92_RS24780 | 88593..88721 | + | 129 | WP_000372429 | hypothetical protein | - |
| LRM92_RS24425 (LRM92_24420) | 88807..88965 | + | 159 | WP_001704449 | hypothetical protein | - |
| LRM92_RS24430 (LRM92_24425) | 89068..89886 | + | 819 | Protein_107 | DUF932 domain-containing protein | - |
| LRM92_RS24435 (LRM92_24430) | 90197..90667 | - | 471 | WP_001526856 | transglycosylase SLT domain-containing protein | virB1 |
| LRM92_RS24440 (LRM92_24435) | 91082..91462 | + | 381 | WP_001151546 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| LRM92_RS24445 (LRM92_24440) | 91655..92341 | + | 687 | WP_156038189 | PAS domain-containing protein | - |
| LRM92_RS24450 (LRM92_24445) | 92435..92662 | + | 228 | WP_001676655 | conjugal transfer relaxosome protein TraY | - |
| LRM92_RS24455 (LRM92_24450) | 92704..93066 | + | 363 | WP_001274201 | type IV conjugative transfer system pilin TraA | - |
| LRM92_RS24460 (LRM92_24455) | 93081..93392 | + | 312 | WP_012825259 | type IV conjugative transfer system protein TraL | traL |
| LRM92_RS24465 (LRM92_24460) | 93414..93980 | + | 567 | WP_000399768 | type IV conjugative transfer system protein TraE | traE |
| LRM92_RS24470 (LRM92_24465) | 93967..94707 | + | 741 | WP_001230719 | type-F conjugative transfer system secretin TraK | traK |
| LRM92_RS24475 (LRM92_24470) | 94707..96128 | + | 1422 | WP_000146700 | F-type conjugal transfer pilus assembly protein TraB | traB |
| LRM92_RS24480 (LRM92_24475) | 96118..96714 | + | 597 | WP_000527896 | conjugal transfer pilus-stabilizing protein TraP | - |
| LRM92_RS24485 (LRM92_24480) | 96692..96937 | + | 246 | WP_010999944 | DUF2689 domain-containing protein | virb4 |
| LRM92_RS24490 (LRM92_24485) | 96934..97449 | + | 516 | WP_001079995 | type IV conjugative transfer system lipoprotein TraV | traV |
| LRM92_RS24495 (LRM92_24490) | 97584..97805 | + | 222 | WP_001278699 | conjugal transfer protein TraR | - |
| LRM92_RS24500 (LRM92_24495) | 97798..98265 | + | 468 | WP_000549562 | hypothetical protein | - |
| LRM92_RS24505 (LRM92_24500) | 98382..98645 | + | 264 | WP_001239255 | hypothetical protein | - |
| LRM92_RS24510 (LRM92_24505) | 98661..101309 | + | 2649 | WP_156038187 | type IV secretion system protein TraC | virb4 |
| LRM92_RS24515 (LRM92_24510) | 101284..101670 | + | 387 | WP_000105164 | type-F conjugative transfer system protein TrbI | - |
| LRM92_RS24520 (LRM92_24515) | 101667..102299 | + | 633 | WP_000871995 | type-F conjugative transfer system protein TraW | traW |
| LRM92_RS24525 (LRM92_24520) | 102296..103288 | + | 993 | WP_000833320 | conjugal transfer pilus assembly protein TraU | traU |
| LRM92_RS24530 (LRM92_24525) | 103307..103615 | + | 309 | WP_010999945 | hypothetical protein | - |
| LRM92_RS24535 (LRM92_24530) | 103600..104238 | + | 639 | WP_000554823 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| LRM92_RS24540 (LRM92_24535) | 104275..104694 | + | 420 | WP_001229397 | HNH endonuclease signature motif containing protein | - |
| LRM92_RS24545 (LRM92_24540) | 104691..106517 | + | 1827 | WP_000827528 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| LRM92_RS24550 (LRM92_24545) | 106528..106743 | + | 216 | WP_000700023 | conjugal transfer protein TrbE | - |
| LRM92_RS24555 (LRM92_24550) | 106755..107504 | + | 750 | WP_001226854 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| LRM92_RS24560 (LRM92_24555) | 107718..108011 | + | 294 | WP_001233881 | type-F conjugative transfer system pilin chaperone TraQ | - |
| LRM92_RS24565 (LRM92_24560) | 107998..108546 | + | 549 | WP_000055840 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| LRM92_RS24570 (LRM92_24565) | 108536..109918 | + | 1383 | WP_001161719 | conjugal transfer pilus assembly protein TraH | traH |
| LRM92_RS24575 (LRM92_24570) | 109915..112737 | + | 2823 | WP_001007086 | conjugal transfer mating-pair stabilization protein TraG | traG |
| LRM92_RS24580 (LRM92_24575) | 112753..113247 | + | 495 | WP_010999946 | entry exclusion protein | - |
| LRM92_RS24585 (LRM92_24580) | 113283..114014 | + | 732 | WP_000782438 | conjugal transfer complement resistance protein TraT | - |
| LRM92_RS24590 (LRM92_24585) | 114391..116553 | + | 2163 | WP_000009318 | type IV conjugative transfer system coupling protein TraD | virb4 |
| LRM92_RS24595 (LRM92_24590) | 116562..116960 | - | 399 | WP_000911322 | type II toxin-antitoxin system VapC family toxin | - |
| LRM92_RS24600 (LRM92_24595) | 116960..117187 | - | 228 | WP_000450265 | toxin-antitoxin system antitoxin VapB | - |