T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 23392..50690
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A4R38_RS24855 (A4R38_24860) | 18459..19256 | + | 798 | WP_015059991 | OXA-48 family carbapenem-hydrolyzing class D beta-lactamase OXA-48 | - |
| A4R38_RS24860 (A4R38_24865) | 19558..20469 | - | 912 | WP_015586033 | LysR family transcriptional regulator | - |
| A4R38_RS24865 (A4R38_24870) | 20772..21980 | + | 1209 | WP_001206290 | IS4-like element IS10A family transposase | - |
| A4R38_RS24870 (A4R38_24875) | 21995..22429 | - | 435 | Protein_35 | CPBP family intramembrane glutamate endopeptidase | - |
| A4R38_RS24875 (A4R38_24880) | 22542..22892 | + | 351 | WP_124065455 | DUF1496 domain-containing protein | - |
| A4R38_RS24880 (A4R38_24885) | 22997..23392 | + | 396 | WP_004187436 | lytic transglycosylase domain-containing protein | - |
| A4R38_RS24885 (A4R38_24890) | 23392..24699 | + | 1308 | WP_015059988 | hypothetical protein | trbA |
| A4R38_RS24890 (A4R38_24895) | 24710..25660 | + | 951 | WP_004206886 | DsbC family protein | trbB |
| A4R38_RS24895 (A4R38_24900) | 25673..27760 | + | 2088 | WP_004206885 | conjugal transfer protein TrbC | - |
| A4R38_RS28660 | 27811..27906 | - | 96 | WP_004206884 | DinQ-like type I toxin DqlB | - |
| A4R38_RS24900 (A4R38_24905) | 29129..30184 | - | 1056 | WP_015060006 | plasmid replication initiator RepA | - |
| A4R38_RS24905 (A4R38_24910) | 30480..30722 | - | 243 | WP_023893611 | IncL/M type plasmid replication protein RepC | - |
| A4R38_RS24910 (A4R38_24915) | 30791..31444 | - | 654 | WP_015060005 | hypothetical protein | - |
| A4R38_RS24915 (A4R38_24920) | 31446..33641 | - | 2196 | WP_015062834 | DotA/TraY family protein | traY |
| A4R38_RS24920 (A4R38_24925) | 33634..34230 | - | 597 | WP_015060003 | hypothetical protein | - |
| A4R38_RS24925 (A4R38_24930) | 34227..35435 | - | 1209 | WP_011091082 | conjugal transfer protein TraW | traW |
| A4R38_RS24930 (A4R38_24935) | 35432..38482 | - | 3051 | WP_004187482 | hypothetical protein | traU |
| A4R38_RS24935 (A4R38_24940) | 38479..38973 | - | 495 | WP_004187480 | hypothetical protein | - |
| A4R38_RS24940 (A4R38_24945) | 39019..39408 | - | 390 | WP_004187479 | DUF6750 family protein | traR |
| A4R38_RS24945 (A4R38_24950) | 39425..39955 | - | 531 | WP_004187478 | conjugal transfer protein TraQ | traQ |
| A4R38_RS24950 (A4R38_24955) | 39979..40683 | - | 705 | WP_015060002 | conjugal transfer protein TraP | traP |
| A4R38_RS24955 (A4R38_24960) | 40695..42044 | - | 1350 | WP_004187474 | conjugal transfer protein TraO | traO |
| A4R38_RS24960 (A4R38_24965) | 42056..43207 | - | 1152 | WP_004187471 | DotH/IcmK family type IV secretion protein | traN |
| A4R38_RS24965 (A4R38_24970) | 43216..43929 | - | 714 | WP_004187467 | DotI/IcmL family type IV secretion protein | traM |
| A4R38_RS24970 (A4R38_24975) | 43997..44407 | + | 411 | WP_004187465 | H-NS family nucleoid-associated regulatory protein | - |
| A4R38_RS24975 (A4R38_24980) | 44436..44591 | + | 156 | WP_172693602 | Hha/YmoA family nucleoid-associated regulatory protein | - |
| A4R38_RS24980 (A4R38_24985) | 44592..45104 | - | 513 | WP_011091071 | hypothetical protein | traL |
| A4R38_RS28555 | 45070..48462 | - | 3393 | WP_223216381 | LPD7 domain-containing protein | - |
| A4R38_RS24990 (A4R38_24995) | 48487..48747 | - | 261 | WP_004187310 | IcmT/TraK family protein | traK |
| A4R38_RS24995 (A4R38_25000) | 48737..49900 | - | 1164 | WP_004187313 | plasmid transfer ATPase TraJ | virB11 |
| A4R38_RS25000 (A4R38_25005) | 49911..50690 | - | 780 | WP_004187315 | type IV secretory system conjugative DNA transfer family protein | traI |
| A4R38_RS25005 (A4R38_25010) | 50687..51187 | - | 501 | WP_004187320 | DotD/TraH family lipoprotein | - |
| A4R38_RS25010 (A4R38_25015) | 51201..53180 | - | 1980 | WP_004187323 | TraI/MobA(P) family conjugative relaxase | - |
| A4R38_RS28560 | 53167..53694 | - | 528 | WP_172740549 | plasmid mobilization protein MobA | - |
| A4R38_RS25020 (A4R38_25025) | 53729..54124 | + | 396 | WP_019725163 | hypothetical protein | - |
| A4R38_RS25025 (A4R38_25030) | 54626..55162 | - | 537 | WP_004187332 | hypothetical protein | - |
| A4R38_RS25030 (A4R38_25035) | 55295..55606 | - | 312 | WP_004187333 | hypothetical protein | - |