T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 1..25930
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A4R39_RS24495 (A4R39_24495) | 1..951 | + | 951 | WP_004206886 | DsbC family protein | trbB |
| A4R39_RS24500 (A4R39_24500) | 964..3051 | + | 2088 | WP_004206885 | conjugal transfer protein TrbC | - |
| A4R39_RS29480 | 3102..3197 | - | 96 | WP_004206884 | DinQ-like type I toxin DqlB | - |
| A4R39_RS24505 (A4R39_24505) | 4407..5477 | - | 1071 | WP_236927548 | plasmid replication initiator RepA | - |
| A4R39_RS24510 (A4R39_24510) | 5774..6004 | - | 231 | WP_004187496 | IncL/M type plasmid replication protein RepC | - |
| A4R39_RS24515 (A4R39_24515) | 6078..6731 | - | 654 | WP_004206935 | hypothetical protein | - |
| A4R39_RS24520 (A4R39_24520) | 6734..8914 | - | 2181 | WP_004187492 | DotA/TraY family protein | traY |
| A4R39_RS24525 (A4R39_24525) | 8907..9557 | - | 651 | WP_004187488 | hypothetical protein | - |
| A4R39_RS24530 (A4R39_24530) | 9554..10762 | - | 1209 | WP_004187486 | conjugal transfer protein TraW | traW |
| A4R39_RS24535 (A4R39_24535) | 10759..13809 | - | 3051 | WP_011154474 | conjugative transfer protein | traU |
| A4R39_RS24540 (A4R39_24540) | 13806..14300 | - | 495 | WP_004187480 | hypothetical protein | - |
| A4R39_RS24545 (A4R39_24545) | 14346..14735 | - | 390 | WP_011154472 | DUF6750 family protein | traR |
| A4R39_RS24550 (A4R39_24550) | 14752..15282 | - | 531 | WP_004187478 | conjugal transfer protein TraQ | traQ |
| A4R39_RS24555 (A4R39_24555) | 15306..16010 | - | 705 | WP_004206933 | conjugal transfer protein TraP | traP |
| A4R39_RS24560 (A4R39_24560) | 16022..17371 | - | 1350 | WP_036970781 | conjugal transfer protein TraO | traO |
| A4R39_RS24565 (A4R39_24565) | 17383..18534 | - | 1152 | WP_015062843 | DotH/IcmK family type IV secretion protein | traN |
| A4R39_RS24570 (A4R39_24570) | 18543..19256 | - | 714 | WP_223294958 | DotI/IcmL family type IV secretion protein | traM |
| A4R39_RS24575 (A4R39_24575) | 19324..19734 | + | 411 | WP_004187465 | H-NS family nucleoid-associated regulatory protein | - |
| A4R39_RS24580 (A4R39_24580) | 19763..19918 | + | 156 | WP_172693602 | Hha/YmoA family nucleoid-associated regulatory protein | - |
| A4R39_RS24585 (A4R39_24585) | 19919..20431 | - | 513 | WP_011091071 | hypothetical protein | traL |
| A4R39_RS29395 | 20397..23702 | - | 3306 | WP_220381329 | LPD7 domain-containing protein | - |
| A4R39_RS24595 (A4R39_24595) | 23727..23987 | - | 261 | WP_004187310 | IcmT/TraK family protein | traK |
| A4R39_RS24600 (A4R39_24600) | 23977..25140 | - | 1164 | WP_004206926 | plasmid transfer ATPase TraJ | virB11 |
| A4R39_RS24605 (A4R39_24605) | 25151..25930 | - | 780 | WP_004187315 | type IV secretory system conjugative DNA transfer family protein | traI |
| A4R39_RS24610 (A4R39_24610) | 25927..26427 | - | 501 | WP_004206925 | DotD/TraH family lipoprotein | - |
| A4R39_RS24615 (A4R39_24615) | 26441..28420 | - | 1980 | WP_004206924 | TraI/MobA(P) family conjugative relaxase | - |
| A4R39_RS24620 (A4R39_24620) | 28407..28724 | - | 318 | WP_004206923 | plasmid mobilization protein MobA | - |
| A4R39_RS24625 (A4R39_24625) | 29000..29365 | + | 366 | WP_015586046 | hypothetical protein | - |
| A4R39_RS24630 (A4R39_24630) | 29866..30402 | - | 537 | WP_036970776 | hypothetical protein | - |
| A4R39_RS24635 (A4R39_24635) | 30535..30846 | - | 312 | WP_004187333 | hypothetical protein | - |