T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 40989..77447
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PXV98_RS27755 (PXV98_27750) | 36245..37021 | + | 777 | WP_094935554 | hypothetical protein | - |
| PXV98_RS27760 (PXV98_27755) | 37052..37321 | - | 270 | WP_048227650 | hypothetical protein | - |
| PXV98_RS27765 (PXV98_27760) | 37394..39694 | - | 2301 | WP_053389033 | F-type conjugative transfer protein TrbC | - |
| PXV98_RS27770 (PXV98_27765) | 39803..40933 | + | 1131 | WP_053389034 | RNA-guided endonuclease TnpB family protein | - |
| PXV98_RS27775 (PXV98_27770) | 40989..42188 | - | 1200 | WP_053389035 | thioredoxin fold domain-containing protein | trbB |
| PXV98_RS27780 (PXV98_27775) | 42241..43449 | - | 1209 | WP_053389036 | hypothetical protein | trbA |
| PXV98_RS27785 (PXV98_27780) | 43752..44384 | - | 633 | WP_227409143 | plasmid IncI1-type surface exclusion protein ExcA | - |
| PXV98_RS27790 (PXV98_27785) | 44446..46605 | - | 2160 | WP_099530113 | DotA/TraY family protein | traY |
| PXV98_RS27795 (PXV98_27790) | 46662..47204 | - | 543 | WP_145996427 | conjugal transfer protein TraX | - |
| PXV98_RS27800 (PXV98_27795) | 47201..48403 | - | 1203 | WP_099530111 | conjugal transfer protein TraW | traW |
| PXV98_RS27805 (PXV98_27800) | 48416..48988 | - | 573 | WP_161556285 | conjugal transfer protein TraV | traV |
| PXV98_RS27810 (PXV98_27805) | 48985..52038 | - | 3054 | WP_048227643 | conjugal transfer protein | traU |
| PXV98_RS27815 (PXV98_27810) | 52110..52841 | - | 732 | WP_069325142 | hypothetical protein | traT |
| PXV98_RS27820 (PXV98_27815) | 53025..53429 | - | 405 | WP_048227642 | DUF6750 family protein | traR |
| PXV98_RS27825 (PXV98_27820) | 53464..53988 | - | 525 | WP_048227641 | conjugal transfer protein TraQ | traQ |
| PXV98_RS27830 (PXV98_27825) | 53988..54761 | - | 774 | WP_129719564 | conjugal transfer protein TraP | traP |
| PXV98_RS27835 (PXV98_27830) | 54742..56058 | - | 1317 | WP_099530109 | conjugal transfer protein TraO | traO |
| PXV98_RS27840 (PXV98_27835) | 56058..57041 | - | 984 | WP_048227638 | DotH/IcmK family type IV secretion protein | traN |
| PXV98_RS27845 (PXV98_27840) | 57052..57753 | - | 702 | WP_048227637 | DotI/IcmL/TraM family protein | traM |
| PXV98_RS27850 (PXV98_27845) | 57759..58109 | - | 351 | WP_048227636 | hypothetical protein | traL |
| PXV98_RS27855 (PXV98_27850) | 59411..62626 | - | 3216 | Protein_63 | LPD7 domain-containing protein | - |
| PXV98_RS27860 (PXV98_27855) | 62698..62985 | - | 288 | WP_048227635 | hypothetical protein | traK |
| PXV98_RS27865 (PXV98_27860) | 62982..64142 | - | 1161 | WP_048227634 | plasmid transfer ATPase TraJ | virB11 |
| PXV98_RS27870 (PXV98_27865) | 64154..64960 | - | 807 | WP_048227633 | type IV secretory system conjugative DNA transfer family protein | traI |
| PXV98_RS27875 (PXV98_27870) | 64957..65430 | - | 474 | WP_048227632 | DotD/TraH family lipoprotein | - |
| PXV98_RS27880 (PXV98_27875) | 65563..66771 | - | 1209 | WP_099530103 | conjugal transfer protein TraF | - |
| PXV98_RS27885 (PXV98_27880) | 66874..67710 | - | 837 | WP_048227630 | hypothetical protein | traE |
| PXV98_RS27890 (PXV98_27885) | 67856..68332 | - | 477 | WP_145996426 | hypothetical protein | - |
| PXV98_RS27895 (PXV98_27890) | 68352..69512 | - | 1161 | WP_048227629 | site-specific integrase | - |
| PXV98_RS27900 (PXV98_27895) | 70014..70400 | + | 387 | Protein_72 | phage tail protein | - |
| PXV98_RS27905 (PXV98_27900) | 71103..71609 | - | 507 | WP_077223963 | sugar O-acetyltransferase | - |
| PXV98_RS27910 (PXV98_27905) | 71664..72950 | - | 1287 | WP_058687259 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| PXV98_RS27915 (PXV98_27910) | 72947..73621 | - | 675 | WP_053389052 | prepilin peptidase | - |
| PXV98_RS27920 (PXV98_27915) | 73606..74088 | - | 483 | WP_069325157 | lytic transglycosylase domain-containing protein | virB1 |
| PXV98_RS27925 (PXV98_27920) | 74173..74787 | - | 615 | WP_052463753 | type 4 pilus major pilin | - |
| PXV98_RS27930 (PXV98_27925) | 74801..75895 | - | 1095 | WP_040231337 | type II secretion system F family protein | - |
| PXV98_RS27935 (PXV98_27930) | 75888..77447 | - | 1560 | WP_048227627 | ATPase, T2SS/T4P/T4SS family | virB11 |
| PXV98_RS27940 (PXV98_27935) | 77450..77950 | - | 501 | WP_053069306 | type IV pilus biogenesis protein PilP | - |
| PXV98_RS27945 (PXV98_27940) | 77934..79238 | - | 1305 | WP_048227626 | type 4b pilus protein PilO2 | - |
| PXV98_RS27950 (PXV98_27945) | 79240..80916 | - | 1677 | WP_048227625 | PilN family type IVB pilus formation outer membrane protein | - |
| PXV98_RS27955 (PXV98_27950) | 80931..81371 | - | 441 | WP_234113460 | type IV pilus biogenesis protein PilM | - |