T4SS

T4SS


T4SS were predicted by using oriTfinder2.

Location: 41603..60814

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
AVR78_RS28260 (AVR78_27450) 36687..36998 + 312 WP_004187333 hypothetical protein -
AVR78_RS28265 (AVR78_27455) 37131..37667 + 537 WP_004206920 hypothetical protein -
AVR78_RS28270 (AVR78_27460) 38168..38533 - 366 WP_004206922 hypothetical protein -
AVR78_RS28275 (AVR78_27465) 38809..39126 + 318 WP_004206923 plasmid mobilization protein MobA -
AVR78_RS28280 (AVR78_27470) 39113..41092 + 1980 WP_004206924 TraI/MobA(P) family conjugative relaxase -
AVR78_RS28285 (AVR78_27475) 41106..41606 + 501 WP_004206925 DotD/TraH family lipoprotein -
AVR78_RS28290 (AVR78_27480) 41603..42382 + 780 WP_004187315 type IV secretory system conjugative DNA transfer family protein traI
AVR78_RS28295 (AVR78_27485) 42393..43556 + 1164 WP_004206926 plasmid transfer ATPase TraJ virB11
AVR78_RS28300 (AVR78_27490) 43546..43806 + 261 WP_004187310 IcmT/TraK family protein traK
AVR78_RS28305 (AVR78_27635) 43831..44631 + 801 WP_072500849 DUF5710 domain-containing protein -
AVR78_RS30465 44606..46039 + 1434 WP_227520075 LPD7 domain-containing protein -
AVR78_RS30470 46236..46484 + 249 WP_227520076 hypothetical protein -
AVR78_RS30475 46517..46726 + 210 WP_227520077 hypothetical protein -
AVR78_RS30480 46776..47165 + 390 WP_227520078 hypothetical protein -
AVR78_RS28315 47189..47623 + 435 WP_159376490 hypothetical protein traL
AVR78_RS28320 47624..47836 - 213 WP_305953721 Hha/YmoA family nucleoid-associated regulatory protein -
AVR78_RS28325 (AVR78_27500) 47808..48218 - 411 WP_004187465 H-NS family nucleoid-associated regulatory protein -
AVR78_RS30485 48649..48864 + 216 WP_227520079 hypothetical protein traM
AVR78_RS30505 49013..49906 + 894 WP_148663137 DotH/IcmK family type IV secretion protein traN
AVR78_RS30510 (AVR78_27510) 49923..50165 + 243 WP_158513517 DotH/IcmK family type IV secretion protein traN
AVR78_RS28345 (AVR78_27515) 50177..51526 + 1350 WP_004206932 conjugal transfer protein TraO traO
AVR78_RS28350 (AVR78_27520) 51538..52242 + 705 WP_004206933 conjugal transfer protein TraP traP
AVR78_RS28355 (AVR78_27525) 52266..52796 + 531 WP_004187478 conjugal transfer protein TraQ traQ
AVR78_RS28360 (AVR78_27530) 52813..53202 + 390 WP_011154472 DUF6750 family protein traR
AVR78_RS28365 (AVR78_27535) 53248..53742 + 495 WP_004187480 hypothetical protein -
AVR78_RS28370 (AVR78_27540) 53739..56789 + 3051 WP_004206934 hypothetical protein traU
AVR78_RS28375 (AVR78_27545) 56786..57994 + 1209 WP_004187486 conjugal transfer protein TraW traW
AVR78_RS28380 (AVR78_27550) 57991..58641 + 651 WP_004187488 hypothetical protein -
AVR78_RS28385 (AVR78_27555) 58634..60814 + 2181 WP_004187492 DotA/TraY family protein traY
AVR78_RS28390 (AVR78_27560) 60817..61470 + 654 WP_004206935 hypothetical protein -
AVR78_RS28395 (AVR78_27565) 61544..61774 + 231 WP_004187496 IncL/M type plasmid replication protein RepC -
AVR78_RS28400 (AVR78_27570) 62071..63126 + 1056 WP_015062846 plasmid replication initiator RepA -
AVR78_RS28405 (AVR78_27575) 64298..64831 - 534 Protein_85 IS110-like element IS4321 family transposase -