T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 2220..12821
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| Locus_0 | 1..1089 | - | 1089 | AFS51515 | TrfA replication initiation protein | - |
| Locus_1 | 1134..1496 | - | 363 | AFS51516 | single strand DNA-binding protein | - |
| Locus_2 | 1604..1975 | + | 372 | AFS51517 | TrbA transcriptional repressor | - |
| Locus_3 | 2220..3197 | + | 978 | AFS51518 | TrbB mating pair formation protein | virB11 |
| Locus_4 | 3229..3636 | + | 408 | AFS51519 | TrbC mating pair formation protein | virB2 |
| Locus_5 | 3639..3950 | + | 312 | AFS51520 | TrbD mating pair formation protein | virB3 |
| Locus_6 | 3947..6505 | + | 2559 | AFS51521 | TrbE mating pair formation protein | virb4 |
| Locus_7 | 6502..7227 | + | 726 | AFS51522 | TrbF mating pair formation protein | virB8 |
| Locus_8 | 7239..8129 | + | 891 | AFS51523 | TrbG mating pair formation protein | virB9 |
| Locus_9 | 8133..8600 | + | 468 | AFS51524 | TrbH mating pair formation protein | - |
| Locus_10 | 8605..10029 | + | 1425 | AFS51575 | TrbI mating pair formation protein | virB10 |
| Locus_11 | 10052..10831 | + | 780 | AFS51525 | TrbJ plasmid entry exclusion protein | virB5 |
| Locus_12 | 10831..11067 | + | 237 | AFS51526 | TrbK plasmid entry exclusion protein | - |
| Locus_13 | 11082..12821 | + | 1740 | AFS51527 | TrbL mating pair formation protein | virB6 |
| Locus_14 | 12847..13149 | + | 303 | AFS51528 | TrbM mating pair formation protein | - |
| Locus_15 | 13159..13788 | + | 630 | AFS51529 | TrbN mating pair formation protein | - |
| Locus_16 | 13788..14258 | + | 471 | AFS51530 | TrbO mating pair formation protein | - |
| Locus_17 | 14262..15017 | + | 756 | AFS51531 | TrbP mating pair formation protein | - |
| Locus_18 | 15031..15264 | + | 234 | AFS51532 | TrbS mating pair formation protein | - |
| Locus_19 | 15274..15936 | + | 663 | AFS51533 | hypothetical protein | - |
| Locus_20 | 15945..16274 | + | 330 | AFS51534 | TrbU mating pair formation protein | - |
| Locus_21 | 16291..16548 | + | 258 | AFS51535 | hypothetical protein | - |
| Locus_22 | 16642..16887 | + | 246 | AFS51536 | hypothetical protein | - |
| Locus_23 | 17030..17734 | - | 705 | AFS51537 | transposase | - |