T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 22682..32863
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| XFFB_RS13040 (XFFB_012180) | 18140..18904 | - | 765 | WP_088371486 | ParA family protein | - |
| XFFB_RS13045 (XFFB_012185) | 18901..19206 | - | 306 | WP_088372195 | transcriptional regulator KorA | - |
| XFFB_RS13050 (XFFB_012190) | 19402..19722 | - | 321 | WP_088371488 | KleE stable inheritance protein | - |
| XFFB_RS13055 (XFFB_012195) | 20308..21219 | - | 912 | WP_088371490 | replication protein RepA | - |
| XFFB_RS13060 (XFFB_012200) | 21263..21610 | - | 348 | WP_088371491 | hypothetical protein | - |
| XFFB_RS13065 (XFFB_012205) | 21654..22013 | - | 360 | WP_004091494 | single-stranded DNA-binding protein | - |
| XFFB_RS13070 (XFFB_012210) | 22130..22486 | + | 357 | WP_088371493 | transcriptional regulator | - |
| XFFB_RS13075 (XFFB_012215) | 22682..23644 | + | 963 | WP_088372298 | P-type conjugative transfer ATPase TrbB | virB11 |
| XFFB_RS13080 (XFFB_012220) | 23657..24049 | + | 393 | WP_042463304 | TrbC/VirB2 family protein | virB2 |
| XFFB_RS13085 (XFFB_012225) | 24052..24372 | + | 321 | WP_088371495 | conjugal transfer protein TrbD | virB3 |
| XFFB_RS13090 (XFFB_012230) | 24360..26924 | + | 2565 | WP_088371497 | conjugal transfer protein TrbE | virb4 |
| XFFB_RS13095 (XFFB_012235) | 26921..27637 | + | 717 | WP_010895237 | conjugal transfer protein TrbF | virB8 |
| XFFB_RS13100 (XFFB_012240) | 27654..28544 | + | 891 | WP_010895236 | P-type conjugative transfer protein TrbG | virB9 |
| XFFB_RS13105 (XFFB_012245) | 28547..29023 | + | 477 | WP_010895235 | conjugal transfer protein TrbH | - |
| XFFB_RS13110 (XFFB_012250) | 29029..30432 | + | 1404 | WP_042464052 | TrbI/VirB10 family protein | virB10 |
| XFFB_RS13115 (XFFB_012255) | 30451..31224 | + | 774 | WP_042464049 | P-type conjugative transfer protein TrbJ | virB5 |
| XFFB_RS13120 (XFFB_012260) | 31241..31477 | + | 237 | WP_010894503 | EexN family lipoprotein | - |
| XFFB_RS13125 (XFFB_012265) | 31499..32863 | + | 1365 | WP_088371499 | P-type conjugative transfer protein TrbL | virB6 |
| XFFB_RS13130 (XFFB_012270) | 32869..33468 | + | 600 | WP_010895232 | conjugal transfer protein TrbN | - |
| XFFB_RS13135 (XFFB_012275) | 33623..33958 | - | 336 | WP_023908247 | helix-turn-helix transcriptional regulator | - |
| XFFB_RS13140 (XFFB_012280) | 33939..34325 | - | 387 | WP_088371501 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| XFFB_RS13145 (XFFB_012285) | 34442..34599 | + | 158 | Protein_38 | recombinase family protein | - |
| XFFB_RS13150 (XFFB_012290) | 34728..35483 | + | 756 | WP_010895228 | alpha/beta hydrolase | - |
| XFFB_RS13155 (XFFB_012295) | 35733..35963 | + | 231 | WP_042464041 | hypothetical protein | - |
| XFFB_RS13160 (XFFB_012300) | 35950..36276 | + | 327 | WP_010895223 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| XFFB_RS13165 (XFFB_012305) | 36341..36613 | + | 273 | WP_010895222 | DUF4190 domain-containing protein | - |
| XFFB_RS13170 (XFFB_012310) | 37087..37572 | - | 486 | WP_010895221 | GNAT family N-acetyltransferase | - |
| XFFB_RS13175 (XFFB_012315) | 37569..37841 | - | 273 | WP_010895220 | DUF1778 domain-containing protein | - |