T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 23285..33301
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PGC28_RS24670 (PGC28_24655) | 19700..20623 | + | 924 | WP_000902514 | SMEK domain-containing protein | - |
| PGC28_RS24675 (PGC28_24660) | 20738..21040 | - | 303 | WP_000717624 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| PGC28_RS24680 (PGC28_24665) | 21037..21450 | - | 414 | WP_000722603 | cag pathogenicity island Cag12 family protein | - |
| PGC28_RS24685 (PGC28_24670) | 21447..23282 | - | 1836 | WP_000053818 | type IV secretory system conjugative DNA transfer family protein | - |
| PGC28_RS24690 (PGC28_24675) | 23285..24316 | - | 1032 | WP_001058465 | P-type DNA transfer ATPase VirB11 | virB11 |
| PGC28_RS24695 (PGC28_24680) | 24318..25523 | - | 1206 | WP_000139139 | VirB10/TraB/TrbI family type IV secretion system protein | virB10 |
| PGC28_RS24700 (PGC28_24685) | 25520..26449 | - | 930 | WP_000783379 | TrbG/VirB9 family P-type conjugative transfer protein | virB9 |
| PGC28_RS24705 (PGC28_24690) | 26454..27167 | - | 714 | WP_000394613 | type IV secretion system protein | virB8 |
| PGC28_RS24715 (PGC28_24700) | 27412..28542 | - | 1131 | WP_000524912 | type IV secretion system protein | virB6 |
| PGC28_RS24720 (PGC28_24705) | 28551..28838 | - | 288 | WP_000835347 | EexN family lipoprotein | - |
| PGC28_RS24725 (PGC28_24710) | 28839..29597 | - | 759 | WP_000744200 | type IV secretion system protein | - |
| PGC28_RS24730 (PGC28_24715) | 29608..32361 | - | 2754 | WP_016731577 | VirB3 family type IV secretion system protein | virb4 |
| PGC28_RS24735 (PGC28_24720) | 32380..32676 | - | 297 | WP_000916182 | TrbC/VirB2 family protein | virB2 |
| PGC28_RS24740 (PGC28_24725) | 32654..33301 | - | 648 | WP_000953525 | lytic transglycosylase domain-containing protein | virB1 |
| PGC28_RS24745 (PGC28_24730) | 33334..33546 | - | 213 | WP_000125172 | hypothetical protein | - |
| PGC28_RS24750 (PGC28_24735) | 33476..33994 | - | 519 | WP_001446885 | transcription termination/antitermination NusG family protein | - |
| PGC28_RS24755 (PGC28_24740) | 34347..35513 | - | 1167 | WP_000539529 | MobP1 family relaxase | - |
| PGC28_RS24760 (PGC28_24745) | 35516..36061 | - | 546 | WP_001436753 | DNA distortion polypeptide 1 | - |
| PGC28_RS24765 (PGC28_24750) | 36387..36659 | - | 273 | WP_000160399 | hypothetical protein | - |
| PGC28_RS24770 (PGC28_24755) | 36672..36821 | - | 150 | WP_000003880 | hypothetical protein | - |
| PGC28_RS24775 (PGC28_24760) | 36891..37070 | - | 180 | WP_000439078 | hypothetical protein | - |
| PGC28_RS24780 (PGC28_24765) | 37113..37442 | - | 330 | WP_000866649 | hypothetical protein | - |
| PGC28_RS24785 (PGC28_24770) | 37535..37750 | - | 216 | WP_001180118 | hypothetical protein | - |
| PGC28_RS24790 (PGC28_24775) | 37740..37985 | - | 246 | WP_000356542 | hypothetical protein | - |