T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 4797..23900
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HS563_RS00010 (pCTXM360_p01) | 324..716 | + | 393 | WP_227648760 | hypothetical protein | - |
| HS563_RS00430 | 706..861 | + | 156 | WP_227520852 | hypothetical protein | - |
| HS563_RS00015 (pCTXM360_p02) | 1362..1727 | - | 366 | WP_011091067 | hypothetical protein | - |
| HS563_RS00435 | 1742..2320 | + | 579 | WP_223811519 | plasmid mobilization protein MobA | - |
| HS563_RS00025 (pCTXM360_p04) | 2307..4286 | + | 1980 | WP_050868819 | TraI/MobA(P) family conjugative relaxase | - |
| HS563_RS00030 (pCTXM360_p05) | 4300..4800 | + | 501 | WP_004187320 | DotD/TraH family lipoprotein | - |
| HS563_RS00035 (pCTXM360_p06) | 4797..5576 | + | 780 | WP_004187315 | type IV secretory system conjugative DNA transfer family protein | traI |
| HS563_RS00040 (pCTXM360_p07) | 5587..6750 | + | 1164 | WP_004187313 | plasmid transfer ATPase TraJ | virB11 |
| HS563_RS00045 (pCTXM360_p08) | 6740..7000 | + | 261 | WP_004187310 | IcmT/TraK family protein | traK |
| HS563_RS00440 | 7025..10120 | + | 3096 | WP_227648761 | LPD7 domain-containing protein | - |
| HS563_RS00055 (pCTXM360_p10) | 10160..10714 | + | 555 | WP_011154467 | hypothetical protein | traL |
| HS563_RS00060 | 10715..10912 | - | 198 | WP_004187464 | Hha/YmoA family nucleoid-associated regulatory protein | - |
| HS563_RS00065 | 10899..11309 | - | 411 | WP_004187465 | H-NS family nucleoid-associated regulatory protein | - |
| HS563_RS00070 (pCTXM360_p12) | 11308..12090 | + | 783 | WP_011091073 | DotI/IcmL family type IV secretion protein | traM |
| HS563_RS00075 (pCTXM360_p13) | 12099..13250 | + | 1152 | WP_011091074 | DotH/IcmK family type IV secretion protein | traN |
| HS563_RS00080 (pCTXM360_p14) | 13262..14611 | + | 1350 | WP_011091075 | conjugal transfer protein TraO | traO |
| HS563_RS00445 | 14623..15039 | + | 417 | WP_227648762 | hypothetical protein | traP |
| HS563_RS00450 | 15008..15328 | + | 321 | WP_227648763 | hypothetical protein | traP |
| HS563_RS00090 (pCTXM360_p16) | 15352..15882 | + | 531 | WP_011091077 | conjugal transfer protein TraQ | traQ |
| HS563_RS00095 (pCTXM360_p17) | 15899..16288 | + | 390 | WP_011091078 | DUF6750 family protein | traR |
| HS563_RS00100 (pCTXM360_p19) | 16334..16828 | + | 495 | WP_011091080 | hypothetical protein | - |
| HS563_RS00105 (pCTXM360_p20) | 16825..19875 | + | 3051 | WP_011091081 | hypothetical protein | traU |
| HS563_RS00110 (pCTXM360_p21) | 19872..21080 | + | 1209 | WP_011091082 | conjugal transfer protein TraW | traW |
| HS563_RS00115 (pCTXM360_p22) | 21077..21727 | + | 651 | WP_011091083 | hypothetical protein | - |
| HS563_RS00120 (pCTXM360_p23) | 21720..23900 | + | 2181 | WP_004187492 | DotA/TraY family protein | traY |
| HS563_RS00125 (pCTXM360_p24) | 23903..24556 | + | 654 | WP_011091084 | hypothetical protein | - |
| HS563_RS00130 (pCTXM360_p25) | 24613..24861 | + | 249 | WP_015062836 | IncL/M type plasmid replication protein RepC | - |
| HS563_RS00135 (pCTXM360_p27) | 25147..26214 | + | 1068 | WP_050868820 | plasmid replication initiator RepA | - |
| HS563_RS00140 (pCTXM360_p28) | 27218..28078 | - | 861 | WP_000027057 | broad-spectrum class A beta-lactamase TEM-1 | - |
| HS563_RS00145 (pCTXM360_p29) | 28261..28818 | - | 558 | WP_001235713 | recombinase family protein | - |