T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 92886..118090
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AVR67_RS25940 (AVR67_25890) | 89156..91354 | - | 2199 | WP_000009360 | type IV conjugative transfer system coupling protein TraD | - |
| AVR67_RS25945 (AVR67_25895) | 91607..92338 | - | 732 | WP_000850422 | conjugal transfer complement resistance protein TraT | - |
| AVR67_RS25950 (AVR67_25900) | 92370..92867 | - | 498 | WP_000605861 | hypothetical protein | - |
| AVR67_RS25955 (AVR67_25905) | 92886..95705 | - | 2820 | WP_001007057 | conjugal transfer mating-pair stabilization protein TraG | traG |
| AVR67_RS25960 (AVR67_25910) | 95702..97075 | - | 1374 | WP_001137364 | conjugal transfer pilus assembly protein TraH | traH |
| AVR67_RS30020 (AVR67_25915) | 97062..97241 | - | 180 | Protein_101 | conjugal transfer protein TrbF | - |
| AVR67_RS25970 (AVR67_25920) | 97328..97753 | + | 426 | WP_000422741 | transposase | - |
| AVR67_RS25975 (AVR67_25925) | 97750..98100 | + | 351 | WP_000624722 | IS66 family insertion sequence element accessory protein TnpB | - |
| AVR67_RS25980 (AVR67_25930) | 98131..99744 | + | 1614 | WP_000080195 | IS66-like element ISEc23 family transposase | - |
| AVR67_RS25985 (AVR67_25935) | 99776..99994 | - | 219 | Protein_105 | conjugal transfer protein TrbF | - |
| AVR67_RS28155 | 99975..100316 | - | 342 | WP_001448115 | P-type conjugative transfer protein TrbJ | - |
| AVR67_RS25990 (AVR67_25940) | 100246..100791 | - | 546 | WP_000059824 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| AVR67_RS25995 (AVR67_25945) | 100778..101062 | - | 285 | WP_001448202 | type-F conjugative transfer system pilin chaperone TraQ | - |
| AVR67_RS26000 (AVR67_25950) | 101189..101527 | - | 339 | WP_001287905 | conjugal transfer protein TrbA | - |
| AVR67_RS26005 (AVR67_25955) | 101543..102286 | - | 744 | WP_001030371 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| AVR67_RS26010 (AVR67_25960) | 102279..102536 | - | 258 | WP_000864320 | conjugal transfer protein TrbE | - |
| AVR67_RS26015 (AVR67_25965) | 102563..104371 | - | 1809 | WP_000821863 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| AVR67_RS26020 (AVR67_25970) | 104368..105006 | - | 639 | WP_001080257 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| AVR67_RS26025 (AVR67_25975) | 105015..105320 | - | 306 | WP_000224411 | hypothetical protein | - |
| AVR67_RS26030 (AVR67_25980) | 105350..106342 | - | 993 | WP_000830838 | conjugal transfer pilus assembly protein TraU | traU |
| AVR67_RS26035 (AVR67_25985) | 106339..106971 | - | 633 | WP_001203720 | type-F conjugative transfer system protein TraW | traW |
| AVR67_RS26040 (AVR67_25990) | 106968..107354 | - | 387 | WP_000214082 | type-F conjugative transfer system protein TrbI | - |
| AVR67_RS26045 (AVR67_25995) | 107351..109978 | - | 2628 | WP_001064239 | type IV secretion system protein TraC | virb4 |
| AVR67_RS28160 | 110138..110359 | - | 222 | WP_001278978 | conjugal transfer protein TraR | - |
| AVR67_RS26050 (AVR67_26000) | 110494..111009 | - | 516 | WP_000809893 | type IV conjugative transfer system lipoprotein TraV | traV |
| AVR67_RS26055 (AVR67_26005) | 111006..111256 | - | 251 | Protein_121 | conjugal transfer protein TrbG | - |
| AVR67_RS26060 (AVR67_26010) | 111249..111569 | - | 321 | WP_001057302 | conjugal transfer protein TrbD | virb4 |
| AVR67_RS26065 (AVR67_26015) | 111556..112140 | - | 585 | WP_000002795 | conjugal transfer pilus-stabilizing protein TraP | - |
| AVR67_RS26070 (AVR67_26020) | 112130..113557 | - | 1428 | WP_000146638 | F-type conjugal transfer pilus assembly protein TraB | traB |
| AVR67_RS26075 (AVR67_26025) | 113557..114285 | - | 729 | WP_001230787 | type-F conjugative transfer system secretin TraK | traK |
| AVR67_RS26080 (AVR67_26030) | 114272..114838 | - | 567 | WP_000399804 | type IV conjugative transfer system protein TraE | traE |
| AVR67_RS26085 (AVR67_26035) | 114860..115171 | - | 312 | WP_000012106 | type IV conjugative transfer system protein TraL | traL |
| AVR67_RS26090 (AVR67_26040) | 115176..115538 | - | 363 | WP_001098998 | type IV conjugative transfer system pilin TraA | - |
| AVR67_RS26095 (AVR67_26045) | 115572..115799 | - | 228 | WP_001254388 | conjugal transfer relaxosome protein TraY | - |
| AVR67_RS26100 (AVR67_26050) | 115894..116580 | - | 687 | WP_000332487 | PAS domain-containing protein | - |
| AVR67_RS26105 (AVR67_26055) | 116774..117157 | - | 384 | WP_001151564 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| AVR67_RS26110 (AVR67_26060) | 117443..118090 | + | 648 | WP_000614282 | transglycosylase SLT domain-containing protein | virB1 |
| AVR67_RS26115 (AVR67_26065) | 118387..119208 | - | 822 | WP_001234469 | DUF932 domain-containing protein | - |
| AVR67_RS26120 (AVR67_26070) | 119328..119615 | - | 288 | WP_000107537 | hypothetical protein | - |
| AVR67_RS30025 | 119913..120086 | + | 174 | Protein_135 | hypothetical protein | - |
| AVR67_RS30030 | 120084..120314 | - | 231 | WP_071587244 | hypothetical protein | - |
| AVR67_RS26140 (AVR67_26090) | 120534..120659 | - | 126 | WP_001372321 | type I toxin-antitoxin system Hok family toxin | - |
| AVR67_RS30035 | 120601..120750 | - | 150 | Protein_138 | plasmid maintenance protein Mok | - |
| AVR67_RS29580 (AVR67_26095) | 120772..120960 | + | 189 | WP_001299721 | hypothetical protein | - |
| AVR67_RS26150 (AVR67_26100) | 120929..121691 | - | 763 | Protein_140 | plasmid SOS inhibition protein A | - |
| AVR67_RS26155 (AVR67_26105) | 121688..122122 | - | 435 | WP_000845901 | conjugation system SOS inhibitor PsiB | - |