T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 27267..55640
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HZD00_RS28645 (HZD00_28540) | 27267..29576 | - | 2310 | WP_004152630 | type IV conjugative transfer system coupling protein TraD | virb4 |
| HZD00_RS28650 (HZD00_28545) | 29936..30667 | - | 732 | WP_004152629 | conjugal transfer complement resistance protein TraT | - |
| HZD00_RS28655 (HZD00_28550) | 30857..31384 | - | 528 | WP_004153030 | hypothetical protein | - |
| HZD00_RS28660 (HZD00_28555) | 31390..34239 | - | 2850 | WP_004152627 | conjugal transfer mating-pair stabilization protein TraG | traG |
| HZD00_RS28665 (HZD00_28560) | 34239..35609 | - | 1371 | WP_004178055 | conjugal transfer pilus assembly protein TraH | traH |
| HZD00_RS28670 (HZD00_28565) | 35596..36024 | - | 429 | WP_004152689 | hypothetical protein | - |
| HZD00_RS28675 (HZD00_28570) | 36017..36589 | - | 573 | WP_004152688 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| HZD00_RS28680 (HZD00_28575) | 36561..36800 | - | 240 | WP_004152687 | type-F conjugative transfer system pilin chaperone TraQ | - |
| HZD00_RS28685 (HZD00_28580) | 36811..37563 | - | 753 | WP_004152686 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| HZD00_RS28690 (HZD00_28585) | 37584..37910 | - | 327 | WP_004152685 | hypothetical protein | - |
| HZD00_RS29720 | 37956..38141 | - | 186 | WP_004152684 | hypothetical protein | - |
| HZD00_RS28695 (HZD00_28590) | 38138..38374 | - | 237 | WP_004152683 | conjugal transfer protein TrbE | - |
| HZD00_RS28700 (HZD00_28595) | 38406..40361 | - | 1956 | WP_004153093 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| HZD00_RS28705 (HZD00_28600) | 40409..41047 | - | 639 | WP_004152682 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| HZD00_RS28710 (HZD00_28605) | 41060..42019 | - | 960 | WP_015065634 | conjugal transfer pilus assembly protein TraU | traU |
| HZD00_RS28715 (HZD00_28610) | 42063..42689 | - | 627 | WP_004152590 | type-F conjugative transfer system protein TraW | traW |
| HZD00_RS28720 (HZD00_28615) | 42689..43078 | - | 390 | WP_004152591 | type-F conjugative transfer system protein TrbI | - |
| HZD00_RS28725 (HZD00_28620) | 43078..45717 | - | 2640 | WP_004152592 | type IV secretion system protein TraC | virb4 |
| HZD00_RS28730 (HZD00_28625) | 45789..46187 | - | 399 | WP_004153071 | hypothetical protein | - |
| HZD00_RS28735 (HZD00_28630) | 46483..46887 | - | 405 | WP_004152594 | hypothetical protein | - |
| HZD00_RS28740 (HZD00_28635) | 46954..47271 | - | 318 | WP_004152595 | hypothetical protein | - |
| HZD00_RS28745 (HZD00_28640) | 47272..47490 | - | 219 | WP_004171484 | hypothetical protein | - |
| HZD00_RS28750 (HZD00_28645) | 47514..47804 | - | 291 | WP_004152596 | hypothetical protein | - |
| HZD00_RS28755 (HZD00_28650) | 47809..48219 | - | 411 | WP_004152597 | lipase chaperone | - |
| HZD00_RS28760 (HZD00_28655) | 48351..48920 | - | 570 | WP_004152598 | type IV conjugative transfer system lipoprotein TraV | traV |
| HZD00_RS28765 (HZD00_28660) | 48943..49539 | - | 597 | WP_004152599 | conjugal transfer pilus-stabilizing protein TraP | - |
| HZD00_RS28770 (HZD00_28665) | 49532..50956 | - | 1425 | WP_004152600 | F-type conjugal transfer pilus assembly protein TraB | traB |
| HZD00_RS28775 (HZD00_28670) | 50956..51696 | - | 741 | WP_004152601 | type-F conjugative transfer system secretin TraK | traK |
| HZD00_RS28780 (HZD00_28675) | 51683..52249 | - | 567 | WP_015060016 | type IV conjugative transfer system protein TraE | traE |
| HZD00_RS28785 (HZD00_28680) | 52269..52574 | - | 306 | WP_004144424 | type IV conjugative transfer system protein TraL | traL |
| HZD00_RS28790 (HZD00_28685) | 52588..52956 | - | 369 | WP_004152496 | type IV conjugative transfer system pilin TraA | - |
| HZD00_RS28795 (HZD00_28690) | 53010..53396 | - | 387 | WP_004152495 | TraY domain-containing protein | - |
| HZD00_RS28800 (HZD00_28695) | 53475..54161 | - | 687 | WP_004152494 | transcriptional regulator TraJ family protein | - |
| HZD00_RS28805 (HZD00_28700) | 54335..54733 | - | 399 | WP_004152493 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| HZD00_RS28810 (HZD00_28705) | 55155..55640 | + | 486 | WP_001568108 | transglycosylase SLT domain-containing protein | virB1 |
| HZD00_RS28815 (HZD00_28710) | 55673..56002 | - | 330 | WP_011977736 | DUF5983 family protein | - |
| HZD00_RS28820 (HZD00_28715) | 56035..56856 | - | 822 | WP_004152492 | DUF932 domain-containing protein | - |
| HZD00_RS28825 (HZD00_28720) | 57676..58509 | - | 834 | WP_004152751 | N-6 DNA methylase | - |
| HZD00_RS28830 (HZD00_28725) | 58560..58706 | - | 147 | WP_004152750 | hypothetical protein | - |
| HZD00_RS28835 (HZD00_28730) | 58801..59148 | - | 348 | WP_004152749 | hypothetical protein | - |
| HZD00_RS28840 (HZD00_28735) | 59205..59558 | - | 354 | WP_004152748 | hypothetical protein | - |
| HZD00_RS28845 (HZD00_28740) | 60188..60538 | - | 351 | WP_004153414 | hypothetical protein | - |