T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 54385..82573
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LMH55_RS28930 (LMH55_28930) | 50357..50791 | + | 435 | WP_000845953 | conjugation system SOS inhibitor PsiB | - |
| LMH55_RS28935 (LMH55_28935) | 50788..51507 | + | 720 | WP_001276217 | plasmid SOS inhibition protein A | - |
| LMH55_RS28940 (LMH55_28940) | 51729..51878 | + | 150 | Protein_67 | plasmid maintenance protein Mok | - |
| LMH55_RS28945 (LMH55_28945) | 51820..51945 | + | 126 | WP_001372321 | type I toxin-antitoxin system Hok family toxin | - |
| LMH55_RS28950 (LMH55_28950) | 52264..52560 | - | 297 | Protein_69 | hypothetical protein | - |
| LMH55_RS28955 (LMH55_28955) | 52860..53156 | + | 297 | WP_001272251 | hypothetical protein | - |
| LMH55_RS28960 (LMH55_28960) | 53267..54088 | + | 822 | WP_001234445 | DUF932 domain-containing protein | - |
| LMH55_RS28965 (LMH55_28965) | 54385..55032 | - | 648 | WP_015059008 | transglycosylase SLT domain-containing protein | virB1 |
| LMH55_RS28970 (LMH55_28970) | 55309..55692 | + | 384 | WP_000124981 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| LMH55_RS28975 (LMH55_28975) | 55883..56569 | + | 687 | WP_015059009 | PAS domain-containing protein | - |
| LMH55_RS28980 (LMH55_28980) | 56663..56890 | + | 228 | WP_001254386 | conjugal transfer relaxosome protein TraY | - |
| LMH55_RS28985 (LMH55_28985) | 56924..57289 | + | 366 | WP_021519752 | type IV conjugative transfer system pilin TraA | - |
| LMH55_RS28990 (LMH55_28990) | 57304..57615 | + | 312 | WP_000012106 | type IV conjugative transfer system protein TraL | traL |
| LMH55_RS28995 (LMH55_28995) | 57637..58203 | + | 567 | WP_000399794 | type IV conjugative transfer system protein TraE | traE |
| LMH55_RS29000 (LMH55_29000) | 58190..58918 | + | 729 | WP_001230787 | type-F conjugative transfer system secretin TraK | traK |
| LMH55_RS29005 (LMH55_29005) | 58918..60345 | + | 1428 | WP_032297072 | F-type conjugal transfer pilus assembly protein TraB | traB |
| LMH55_RS29010 (LMH55_29010) | 60335..60925 | + | 591 | WP_000002778 | conjugal transfer pilus-stabilizing protein TraP | - |
| LMH55_RS29015 (LMH55_29015) | 60912..61109 | + | 198 | WP_001324648 | conjugal transfer protein TrbD | - |
| LMH55_RS29020 (LMH55_29020) | 61121..61372 | + | 252 | WP_001038341 | conjugal transfer protein TrbG | - |
| LMH55_RS29025 (LMH55_29025) | 61369..61884 | + | 516 | WP_062955122 | type IV conjugative transfer system lipoprotein TraV | traV |
| LMH55_RS29030 (LMH55_29030) | 62019..62240 | + | 222 | WP_001278692 | conjugal transfer protein TraR | - |
| LMH55_RS29035 (LMH55_29035) | 62400..65027 | + | 2628 | WP_015059012 | type IV secretion system protein TraC | virb4 |
| LMH55_RS29040 (LMH55_29040) | 65024..65410 | + | 387 | WP_015059013 | type-F conjugative transfer system protein TrbI | - |
| LMH55_RS29045 (LMH55_29045) | 65407..66039 | + | 633 | WP_001203735 | type-F conjugative transfer system protein TraW | traW |
| LMH55_RS29050 (LMH55_29050) | 66036..67028 | + | 993 | WP_000830838 | conjugal transfer pilus assembly protein TraU | traU |
| LMH55_RS29055 (LMH55_29055) | 67055..67363 | + | 309 | WP_000412447 | hypothetical protein | - |
| LMH55_RS29060 (LMH55_29060) | 67426..67947 | + | 522 | WP_015059014 | hypothetical protein | - |
| LMH55_RS29065 (LMH55_29065) | 67974..68612 | + | 639 | WP_000087532 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| LMH55_RS29070 (LMH55_29070) | 68609..68980 | + | 372 | WP_000056336 | hypothetical protein | - |
| LMH55_RS29075 (LMH55_29075) | 69006..69428 | + | 423 | WP_001229309 | HNH endonuclease signature motif containing protein | - |
| LMH55_RS29080 (LMH55_29080) | 69425..71275 | + | 1851 | WP_015059015 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| LMH55_RS29085 (LMH55_29085) | 71302..71559 | + | 258 | WP_053913405 | conjugal transfer protein TrbE | - |
| LMH55_RS29090 (LMH55_29090) | 71546..72295 | + | 750 | WP_072354014 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| LMH55_RS29095 (LMH55_29095) | 72456..72692 | + | 237 | WP_000270010 | type-F conjugative transfer system pilin chaperone TraQ | - |
| LMH55_RS29100 (LMH55_29100) | 72679..73224 | + | 546 | WP_000059817 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| LMH55_RS29105 (LMH55_29105) | 73214..73528 | + | 315 | WP_001384255 | P-type conjugative transfer protein TrbJ | - |
| LMH55_RS29110 (LMH55_29110) | 73482..73874 | + | 393 | WP_000126338 | F-type conjugal transfer protein TrbF | - |
| LMH55_RS29115 (LMH55_29115) | 73861..75234 | + | 1374 | WP_000944325 | conjugal transfer pilus assembly protein TraH | traH |
| LMH55_RS29120 (LMH55_29120) | 75231..78047 | + | 2817 | WP_247382933 | conjugal transfer mating-pair stabilization protein TraG | traG |
| LMH55_RS29125 (LMH55_29125) | 78080..78601 | + | 522 | WP_000632668 | conjugal transfer entry exclusion protein TraS | - |
| LMH55_RS29130 (LMH55_29130) | 78626..79357 | + | 732 | WP_021559024 | conjugal transfer complement resistance protein TraT | - |
| LMH55_RS29135 (LMH55_29135) | 79560..80297 | + | 738 | WP_015059020 | hypothetical protein | - |
| LMH55_RS29140 (LMH55_29140) | 80348..82573 | + | 2226 | WP_000009363 | type IV conjugative transfer system coupling protein TraD | virb4 |