T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 39853..68041
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LMH54_RS28475 (LMH54_28475) | 35825..36259 | + | 435 | WP_000845953 | conjugation system SOS inhibitor PsiB | - |
| LMH54_RS28480 (LMH54_28480) | 36256..36975 | + | 720 | WP_001276217 | plasmid SOS inhibition protein A | - |
| LMH54_RS28485 (LMH54_28485) | 37197..37346 | + | 150 | Protein_49 | plasmid maintenance protein Mok | - |
| LMH54_RS28490 (LMH54_28490) | 37288..37413 | + | 126 | WP_001372321 | type I toxin-antitoxin system Hok family toxin | - |
| LMH54_RS28495 (LMH54_28495) | 37732..38028 | - | 297 | Protein_51 | hypothetical protein | - |
| LMH54_RS28500 (LMH54_28500) | 38328..38624 | + | 297 | WP_001272251 | hypothetical protein | - |
| LMH54_RS28505 (LMH54_28505) | 38735..39556 | + | 822 | WP_001234445 | DUF932 domain-containing protein | - |
| LMH54_RS28510 (LMH54_28510) | 39853..40500 | - | 648 | WP_015059008 | transglycosylase SLT domain-containing protein | virB1 |
| LMH54_RS28515 (LMH54_28515) | 40777..41160 | + | 384 | WP_000124981 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| LMH54_RS28520 (LMH54_28520) | 41351..42037 | + | 687 | WP_015059009 | PAS domain-containing protein | - |
| LMH54_RS28525 (LMH54_28525) | 42131..42358 | + | 228 | WP_001254386 | conjugal transfer relaxosome protein TraY | - |
| LMH54_RS28530 (LMH54_28530) | 42392..42757 | + | 366 | WP_021519752 | type IV conjugative transfer system pilin TraA | - |
| LMH54_RS28535 (LMH54_28535) | 42772..43083 | + | 312 | WP_000012106 | type IV conjugative transfer system protein TraL | traL |
| LMH54_RS28540 (LMH54_28540) | 43105..43671 | + | 567 | WP_000399794 | type IV conjugative transfer system protein TraE | traE |
| LMH54_RS28545 (LMH54_28545) | 43658..44386 | + | 729 | WP_001230787 | type-F conjugative transfer system secretin TraK | traK |
| LMH54_RS28550 (LMH54_28550) | 44386..45813 | + | 1428 | WP_032297072 | F-type conjugal transfer pilus assembly protein TraB | traB |
| LMH54_RS28555 (LMH54_28555) | 45803..46393 | + | 591 | WP_000002778 | conjugal transfer pilus-stabilizing protein TraP | - |
| LMH54_RS28560 (LMH54_28560) | 46380..46577 | + | 198 | WP_001324648 | conjugal transfer protein TrbD | - |
| LMH54_RS28565 (LMH54_28565) | 46589..46840 | + | 252 | WP_001038341 | conjugal transfer protein TrbG | - |
| LMH54_RS28570 (LMH54_28570) | 46837..47352 | + | 516 | WP_062955122 | type IV conjugative transfer system lipoprotein TraV | traV |
| LMH54_RS28575 (LMH54_28575) | 47487..47708 | + | 222 | WP_001278692 | conjugal transfer protein TraR | - |
| LMH54_RS28580 (LMH54_28580) | 47868..50495 | + | 2628 | WP_015059012 | type IV secretion system protein TraC | virb4 |
| LMH54_RS28585 (LMH54_28585) | 50492..50878 | + | 387 | WP_015059013 | type-F conjugative transfer system protein TrbI | - |
| LMH54_RS28590 (LMH54_28590) | 50875..51507 | + | 633 | WP_001203735 | type-F conjugative transfer system protein TraW | traW |
| LMH54_RS28595 (LMH54_28595) | 51504..52496 | + | 993 | WP_000830838 | conjugal transfer pilus assembly protein TraU | traU |
| LMH54_RS28600 (LMH54_28600) | 52523..52831 | + | 309 | WP_000412447 | hypothetical protein | - |
| LMH54_RS28605 (LMH54_28605) | 52894..53415 | + | 522 | WP_015059014 | hypothetical protein | - |
| LMH54_RS28610 (LMH54_28610) | 53442..54080 | + | 639 | WP_000087532 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| LMH54_RS28615 (LMH54_28615) | 54077..54448 | + | 372 | WP_000056336 | hypothetical protein | - |
| LMH54_RS28620 (LMH54_28620) | 54474..54896 | + | 423 | WP_001229309 | HNH endonuclease signature motif containing protein | - |
| LMH54_RS28625 (LMH54_28625) | 54893..56743 | + | 1851 | WP_015059015 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| LMH54_RS28630 (LMH54_28630) | 56770..57027 | + | 258 | WP_053913405 | conjugal transfer protein TrbE | - |
| LMH54_RS28635 (LMH54_28635) | 57014..57763 | + | 750 | WP_072354014 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| LMH54_RS28640 (LMH54_28640) | 57924..58160 | + | 237 | WP_000270010 | type-F conjugative transfer system pilin chaperone TraQ | - |
| LMH54_RS28645 (LMH54_28645) | 58147..58692 | + | 546 | WP_000059817 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| LMH54_RS28650 (LMH54_28650) | 58682..58996 | + | 315 | WP_001384255 | P-type conjugative transfer protein TrbJ | - |
| LMH54_RS28655 (LMH54_28655) | 58950..59342 | + | 393 | WP_000126338 | F-type conjugal transfer protein TrbF | - |
| LMH54_RS28660 (LMH54_28660) | 59329..60702 | + | 1374 | WP_000944325 | conjugal transfer pilus assembly protein TraH | traH |
| LMH54_RS28665 (LMH54_28665) | 60699..63515 | + | 2817 | WP_015059018 | conjugal transfer mating-pair stabilization protein TraG | traG |
| LMH54_RS28670 (LMH54_28670) | 63548..64069 | + | 522 | WP_000632668 | conjugal transfer entry exclusion protein TraS | - |
| LMH54_RS28675 (LMH54_28675) | 64094..64825 | + | 732 | WP_021559024 | conjugal transfer complement resistance protein TraT | - |
| LMH54_RS28680 (LMH54_28680) | 65028..65765 | + | 738 | WP_015059020 | hypothetical protein | - |
| LMH54_RS28685 (LMH54_28685) | 65816..68041 | + | 2226 | WP_000009363 | type IV conjugative transfer system coupling protein TraD | virb4 |