T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 158846..188058
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LMH54_RS27960 (LMH54_27960) | 158846..161128 | - | 2283 | WP_048255491 | type IV conjugative transfer system coupling protein TraD | virb4 |
| LMH54_RS27965 (LMH54_27965) | 161486..162217 | - | 732 | WP_004152629 | conjugal transfer complement resistance protein TraT | - |
| LMH54_RS27970 (LMH54_27970) | 162407..162934 | - | 528 | WP_029498351 | conjugal transfer protein TraS | - |
| LMH54_RS27975 (LMH54_27975) | 162940..165789 | - | 2850 | WP_023329044 | conjugal transfer mating-pair stabilization protein TraG | traG |
| LMH54_RS27980 (LMH54_27980) | 165789..167168 | - | 1380 | WP_023158000 | conjugal transfer pilus assembly protein TraH | traH |
| LMH54_RS27985 (LMH54_27985) | 167146..167589 | - | 444 | WP_023158001 | F-type conjugal transfer protein TrbF | - |
| LMH54_RS27990 (LMH54_27990) | 167635..168192 | - | 558 | WP_023158002 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| LMH54_RS27995 (LMH54_27995) | 168164..168403 | - | 240 | WP_048255490 | type-F conjugative transfer system pilin chaperone TraQ | - |
| LMH54_RS28000 (LMH54_28000) | 168414..169166 | - | 753 | WP_015632513 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| LMH54_RS28005 (LMH54_28005) | 169187..169513 | - | 327 | WP_015632512 | hypothetical protein | - |
| LMH54_RS28010 (LMH54_28010) | 169526..169774 | - | 249 | WP_004152675 | hypothetical protein | - |
| LMH54_RS28015 (LMH54_28015) | 169752..170006 | - | 255 | WP_032433943 | conjugal transfer protein TrbE | - |
| LMH54_RS28020 (LMH54_28020) | 170038..171993 | - | 1956 | WP_015065533 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| LMH54_RS28025 (LMH54_28025) | 172052..172699 | - | 648 | WP_015632510 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| LMH54_RS28030 (LMH54_28030) | 172975..173964 | - | 990 | WP_015632509 | conjugal transfer pilus assembly protein TraU | traU |
| LMH54_RS28035 (LMH54_28035) | 173961..174362 | - | 402 | WP_004194979 | hypothetical protein | - |
| LMH54_RS28040 (LMH54_28040) | 174397..175032 | - | 636 | WP_047670041 | type-F conjugative transfer system protein TraW | traW |
| LMH54_RS28045 (LMH54_28045) | 175032..175421 | - | 390 | WP_015632507 | type-F conjugative transfer system protein TrbI | - |
| LMH54_RS28050 (LMH54_28050) | 175421..178060 | - | 2640 | WP_015632506 | type IV secretion system protein TraC | virb4 |
| LMH54_RS28055 (LMH54_28055) | 178132..178530 | - | 399 | WP_015632505 | hypothetical protein | - |
| LMH54_RS28060 (LMH54_28060) | 178538..178927 | - | 390 | WP_015632504 | hypothetical protein | - |
| LMH54_RS28065 (LMH54_28065) | 178970..179374 | - | 405 | WP_032433941 | hypothetical protein | - |
| LMH54_RS28070 (LMH54_28070) | 179441..179752 | - | 312 | WP_015632502 | hypothetical protein | - |
| LMH54_RS28075 (LMH54_28075) | 179753..179971 | - | 219 | WP_004171484 | hypothetical protein | - |
| LMH54_RS28080 (LMH54_28080) | 180010..180279 | - | 270 | WP_032433956 | hypothetical protein | - |
| LMH54_RS28085 (LMH54_28085) | 180284..180694 | - | 411 | WP_015632501 | hypothetical protein | - |
| LMH54_RS28090 (LMH54_28090) | 180826..181410 | - | 585 | WP_014386196 | type IV conjugative transfer system lipoprotein TraV | traV |
| LMH54_RS28095 (LMH54_28095) | 181433..182029 | - | 597 | WP_047670043 | conjugal transfer pilus-stabilizing protein TraP | - |
| LMH54_RS28100 (LMH54_28100) | 182022..183446 | - | 1425 | WP_015632498 | F-type conjugal transfer pilus assembly protein TraB | traB |
| LMH54_RS28105 (LMH54_28105) | 183446..184186 | - | 741 | WP_047670045 | type-F conjugative transfer system secretin TraK | traK |
| LMH54_RS28110 (LMH54_28110) | 184173..184739 | - | 567 | WP_016831035 | type IV conjugative transfer system protein TraE | traE |
| LMH54_RS28115 (LMH54_28115) | 184759..185064 | - | 306 | WP_004144424 | type IV conjugative transfer system protein TraL | traL |
| LMH54_RS28120 (LMH54_28120) | 185078..185446 | - | 369 | WP_004194426 | type IV conjugative transfer system pilin TraA | - |
| LMH54_RS28125 (LMH54_28125) | 185508..185714 | - | 207 | WP_171773970 | TraY domain-containing protein | - |
| LMH54_RS28130 (LMH54_28130) | 185847..186566 | - | 720 | WP_016831034 | conjugal transfer protein TrbJ | - |
| LMH54_RS28135 (LMH54_28135) | 186766..187182 | - | 417 | WP_072145360 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| LMH54_RS28140 (LMH54_28140) | 187573..188058 | + | 486 | WP_004178063 | transglycosylase SLT domain-containing protein | virB1 |
| LMH54_RS28145 (LMH54_28145) | 188091..188420 | - | 330 | WP_013214015 | DUF5983 family protein | - |
| LMH54_RS28150 (LMH54_28150) | 188453..189274 | - | 822 | WP_004152492 | DUF932 domain-containing protein | - |
| LMH54_RS28155 (LMH54_28155) | 190103..190666 | - | 564 | WP_004182054 | methyltransferase | - |
| LMH54_RS28160 (LMH54_28160) | 190714..192069 | - | 1356 | WP_014386157 | DUF3560 domain-containing protein | - |
| LMH54_RS28165 (LMH54_28165) | 192121..192351 | - | 231 | WP_001568051 | hypothetical protein | - |
| LMH54_RS28170 (LMH54_28170) | 192443..192670 | - | 228 | WP_001568050 | hypothetical protein | - |