T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 50610..80408
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LMH59_RS27350 (LMH59_27350) | 50610..52922 | - | 2313 | WP_232152220 | type IV conjugative transfer system coupling protein TraD | virb4 |
| LMH59_RS27355 (LMH59_27355) | 53049..53738 | - | 690 | WP_014343485 | hypothetical protein | - |
| LMH59_RS27360 (LMH59_27360) | 53931..54662 | - | 732 | WP_013214036 | conjugal transfer complement resistance protein TraT | - |
| LMH59_RS27365 (LMH59_27365) | 54913..55515 | - | 603 | WP_013214035 | conjugal transfer protein TraS | - |
| LMH59_RS27370 (LMH59_27370) | 55538..58360 | - | 2823 | WP_013214034 | conjugal transfer mating-pair stabilization protein TraG | traG |
| LMH59_RS27375 (LMH59_27375) | 58360..59739 | - | 1380 | WP_074160414 | conjugal transfer pilus assembly protein TraH | traH |
| LMH59_RS27380 (LMH59_27380) | 59717..60160 | - | 444 | WP_013214032 | F-type conjugal transfer protein TrbF | - |
| LMH59_RS27385 (LMH59_27385) | 60206..60763 | - | 558 | WP_013214031 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| LMH59_RS27390 (LMH59_27390) | 60735..60974 | - | 240 | WP_004144400 | type-F conjugative transfer system pilin chaperone TraQ | - |
| LMH59_RS27395 (LMH59_27395) | 60985..61737 | - | 753 | WP_004152677 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| LMH59_RS27400 (LMH59_27400) | 61758..62084 | - | 327 | WP_013214030 | hypothetical protein | - |
| LMH59_RS27405 (LMH59_27405) | 62097..62345 | - | 249 | WP_013214029 | hypothetical protein | - |
| LMH59_RS27410 (LMH59_27410) | 62323..62547 | - | 225 | WP_139615448 | conjugal transfer protein TrbE | - |
| LMH59_RS27415 (LMH59_27415) | 62592..63572 | + | 981 | WP_000019445 | IS5-like element ISKpn26 family transposase | - |
| LMH59_RS27420 (LMH59_27420) | 63703..63777 | - | 75 | Protein_72 | conjugal transfer protein TrbE | - |
| LMH59_RS27425 (LMH59_27425) | 63809..65764 | - | 1956 | WP_085845732 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| LMH59_RS27430 (LMH59_27430) | 65823..66461 | - | 639 | WP_069985712 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| LMH59_RS27435 (LMH59_27435) | 66474..67463 | - | 990 | WP_029497420 | conjugal transfer pilus assembly protein TraU | traU |
| LMH59_RS27440 (LMH59_27440) | 67460..67861 | - | 402 | WP_004194979 | hypothetical protein | - |
| LMH59_RS27445 (LMH59_27445) | 67896..68531 | - | 636 | WP_029497419 | type-F conjugative transfer system protein TraW | traW |
| LMH59_RS27450 (LMH59_27450) | 68531..68920 | - | 390 | WP_004167468 | type-F conjugative transfer system protein TrbI | - |
| LMH59_RS27455 (LMH59_27455) | 68920..71559 | - | 2640 | WP_013214024 | type IV secretion system protein TraC | virb4 |
| LMH59_RS27460 (LMH59_27460) | 71631..72029 | - | 399 | WP_023179972 | hypothetical protein | - |
| LMH59_RS27465 (LMH59_27465) | 72408..72812 | - | 405 | WP_004197817 | hypothetical protein | - |
| LMH59_RS27470 (LMH59_27470) | 72879..73190 | - | 312 | WP_094965623 | hypothetical protein | - |
| LMH59_RS27475 (LMH59_27475) | 73191..73409 | - | 219 | WP_004195468 | hypothetical protein | - |
| LMH59_RS27480 (LMH59_27480) | 73732..74316 | - | 585 | WP_032440547 | type IV conjugative transfer system lipoprotein TraV | traV |
| LMH59_RS27485 (LMH59_27485) | 74389..75813 | - | 1425 | WP_004194260 | F-type conjugal transfer pilus assembly protein TraB | traB |
| LMH59_RS27490 (LMH59_27490) | 75813..76553 | - | 741 | WP_013023821 | type-F conjugative transfer system secretin TraK | traK |
| LMH59_RS27495 (LMH59_27495) | 76540..77106 | - | 567 | WP_004144423 | type IV conjugative transfer system protein TraE | traE |
| LMH59_RS27500 (LMH59_27500) | 77126..77431 | - | 306 | WP_004144424 | type IV conjugative transfer system protein TraL | traL |
| LMH59_RS27505 (LMH59_27505) | 77445..77813 | - | 369 | WP_004194426 | type IV conjugative transfer system pilin TraA | - |
| LMH59_RS28375 | 77882..78082 | - | 201 | WP_004194116 | TraY domain-containing protein | - |
| LMH59_RS27510 (LMH59_27510) | 78168..78869 | - | 702 | WP_004194113 | hypothetical protein | - |
| LMH59_RS27515 (LMH59_27515) | 79099..79491 | - | 393 | WP_004194114 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| LMH59_RS27520 (LMH59_27520) | 79923..80408 | + | 486 | WP_032440470 | transglycosylase SLT domain-containing protein | virB1 |
| LMH59_RS27525 (LMH59_27525) | 80441..80770 | - | 330 | WP_071994324 | DUF5983 family protein | - |
| LMH59_RS27530 (LMH59_27530) | 80803..81624 | - | 822 | WP_023287138 | DUF932 domain-containing protein | - |
| LMH59_RS27535 (LMH59_27535) | 82454..82867 | - | 414 | WP_069985713 | helix-turn-helix domain-containing protein | - |
| LMH59_RS27540 (LMH59_27540) | 82868..83146 | - | 279 | WP_004152721 | helix-turn-helix transcriptional regulator | - |
| LMH59_RS27545 (LMH59_27545) | 83136..83456 | - | 321 | WP_004152720 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| LMH59_RS27550 (LMH59_27550) | 83537..83761 | - | 225 | WP_014343499 | hypothetical protein | - |
| LMH59_RS27555 (LMH59_27555) | 83772..83984 | - | 213 | WP_019706020 | hypothetical protein | - |
| LMH59_RS27560 (LMH59_27560) | 84045..84401 | - | 357 | WP_019706019 | hypothetical protein | - |
| LMH59_RS27565 (LMH59_27565) | 85033..85383 | - | 351 | WP_023287104 | hypothetical protein | - |