T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 82790..112810
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LMH56_RS28425 (LMH56_28425) | 82790..85102 | - | 2313 | WP_013023832 | type IV conjugative transfer system coupling protein TraD | virb4 |
| LMH56_RS28430 (LMH56_28430) | 85229..85918 | - | 690 | WP_013023831 | hypothetical protein | - |
| LMH56_RS28435 (LMH56_28435) | 86111..86842 | - | 732 | WP_013023830 | conjugal transfer complement resistance protein TraT | - |
| LMH56_RS28440 (LMH56_28440) | 87028..87561 | - | 534 | WP_014343486 | conjugal transfer protein TraS | - |
| LMH56_RS28445 (LMH56_28445) | 87564..87866 | - | 303 | WP_247476054 | hypothetical protein | - |
| LMH56_RS28450 (LMH56_28450) | 87848..88828 | - | 981 | WP_000019473 | IS5-like element ISKpn26 family transposase | - |
| LMH56_RS28455 (LMH56_28455) | 88878..91613 | - | 2736 | Protein_106 | conjugal transfer mating-pair stabilization protein TraG | - |
| LMH56_RS28460 (LMH56_28460) | 91613..92992 | - | 1380 | WP_014343487 | conjugal transfer pilus assembly protein TraH | traH |
| LMH56_RS28465 (LMH56_28465) | 92970..93413 | - | 444 | WP_013023828 | F-type conjugal transfer protein TrbF | - |
| LMH56_RS28470 (LMH56_28470) | 93459..94016 | - | 558 | WP_013214031 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| LMH56_RS28475 (LMH56_28475) | 93988..94227 | - | 240 | WP_004144400 | type-F conjugative transfer system pilin chaperone TraQ | - |
| LMH56_RS28480 (LMH56_28480) | 94238..94990 | - | 753 | WP_048337413 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| LMH56_RS28485 (LMH56_28485) | 95011..95337 | - | 327 | WP_004152676 | hypothetical protein | - |
| LMH56_RS28490 (LMH56_28490) | 95350..95598 | - | 249 | WP_004152675 | hypothetical protein | - |
| LMH56_RS28495 (LMH56_28495) | 95576..95830 | - | 255 | WP_004152674 | conjugal transfer protein TrbE | - |
| LMH56_RS28500 (LMH56_28500) | 95862..97817 | - | 1956 | WP_013023827 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| LMH56_RS28505 (LMH56_28505) | 97876..98514 | - | 639 | WP_011977786 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| LMH56_RS28510 (LMH56_28510) | 98527..99516 | - | 990 | WP_009309872 | conjugal transfer pilus assembly protein TraU | traU |
| LMH56_RS28515 (LMH56_28515) | 99513..99902 | - | 390 | WP_004194992 | hypothetical protein | - |
| LMH56_RS28520 (LMH56_28520) | 99944..100570 | - | 627 | WP_009309871 | type-F conjugative transfer system protein TraW | traW |
| LMH56_RS28525 (LMH56_28525) | 100570..100959 | - | 390 | WP_004197815 | type-F conjugative transfer system protein TrbI | - |
| LMH56_RS28530 (LMH56_28530) | 100959..103598 | - | 2640 | WP_013023824 | type IV secretion system protein TraC | virb4 |
| LMH56_RS28535 (LMH56_28535) | 103670..104068 | - | 399 | WP_013609531 | hypothetical protein | - |
| LMH56_RS28540 (LMH56_28540) | 104444..104848 | - | 405 | WP_004197817 | hypothetical protein | - |
| LMH56_RS28545 (LMH56_28545) | 104915..105226 | - | 312 | WP_015344986 | hypothetical protein | - |
| LMH56_RS28550 (LMH56_28550) | 105227..105445 | - | 219 | WP_015344987 | hypothetical protein | - |
| LMH56_RS28555 (LMH56_28555) | 105551..105961 | - | 411 | WP_009309869 | hypothetical protein | - |
| LMH56_RS28560 (LMH56_28560) | 106093..106677 | - | 585 | WP_013023822 | type IV conjugative transfer system lipoprotein TraV | traV |
| LMH56_RS28565 (LMH56_28565) | 106791..108215 | - | 1425 | WP_004194260 | F-type conjugal transfer pilus assembly protein TraB | traB |
| LMH56_RS28570 (LMH56_28570) | 108215..108955 | - | 741 | WP_013023821 | type-F conjugative transfer system secretin TraK | traK |
| LMH56_RS28575 (LMH56_28575) | 108942..109508 | - | 567 | WP_004144423 | type IV conjugative transfer system protein TraE | traE |
| LMH56_RS28580 (LMH56_28580) | 109528..109833 | - | 306 | WP_004144424 | type IV conjugative transfer system protein TraL | traL |
| LMH56_RS28585 (LMH56_28585) | 109847..110215 | - | 369 | WP_004194426 | type IV conjugative transfer system pilin TraA | - |
| LMH56_RS29780 | 110284..110484 | - | 201 | WP_004194116 | TraY domain-containing protein | - |
| LMH56_RS28590 (LMH56_28590) | 110570..111271 | - | 702 | WP_004194113 | hypothetical protein | - |
| LMH56_RS28595 (LMH56_28595) | 111501..111893 | - | 393 | WP_004194114 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| LMH56_RS28600 (LMH56_28600) | 112325..112810 | + | 486 | WP_001568108 | transglycosylase SLT domain-containing protein | virB1 |
| LMH56_RS28605 (LMH56_28605) | 112843..113172 | - | 330 | WP_013214015 | DUF5983 family protein | - |
| LMH56_RS28610 (LMH56_28610) | 113205..114026 | - | 822 | WP_004152492 | DUF932 domain-containing protein | - |
| LMH56_RS28615 (LMH56_28615) | 114834..116042 | + | 1209 | WP_015344990 | IS256 family transposase | - |
| LMH56_RS28620 (LMH56_28620) | 116178..116591 | - | 414 | WP_013023817 | helix-turn-helix domain-containing protein | - |
| LMH56_RS28625 (LMH56_28625) | 116592..116870 | - | 279 | WP_004152721 | helix-turn-helix transcriptional regulator | - |
| LMH56_RS28630 (LMH56_28630) | 116860..117180 | - | 321 | WP_004152720 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| LMH56_RS28635 (LMH56_28635) | 117261..117485 | - | 225 | WP_004152719 | hypothetical protein | - |
| LMH56_RS28640 (LMH56_28640) | 117496..117708 | - | 213 | WP_013023815 | hypothetical protein | - |