T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 49476..89272
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LMH53_RS29075 (LMH53_29075) | 47192..49483 | - | 2292 | WP_001289276 | F-type conjugative transfer protein TrbC | - |
| LMH53_RS29080 (LMH53_29080) | 49476..50546 | - | 1071 | WP_000151582 | IncI1-type conjugal transfer protein TrbB | trbB |
| LMH53_RS29085 (LMH53_29085) | 50565..51773 | - | 1209 | WP_000121273 | IncI1-type conjugal transfer protein TrbA | trbA |
| LMH53_RS29090 (LMH53_29090) | 52080..52859 | - | 780 | WP_275450201 | protein FinQ | - |
| LMH53_RS29095 (LMH53_29095) | 53486..53638 | + | 153 | WP_001303307 | Hok/Gef family protein | - |
| LMH53_RS29100 (LMH53_29100) | 53710..53961 | - | 252 | WP_001291968 | hypothetical protein | - |
| LMH53_RS29105 (LMH53_29105) | 54885..55061 | - | 177 | WP_001054900 | hypothetical protein | - |
| LMH53_RS29110 (LMH53_29110) | 55270..55479 | - | 210 | WP_001140545 | hemolysin expression modulator Hha | - |
| LMH53_RS29115 (LMH53_29115) | 55577..56191 | - | 615 | WP_000578649 | plasmid IncI1-type surface exclusion protein ExcA | - |
| LMH53_RS29120 (LMH53_29120) | 56267..58435 | - | 2169 | WP_000698360 | IncI1-type conjugal transfer membrane protein TraY | traY |
| LMH53_RS29125 (LMH53_29125) | 58532..59116 | - | 585 | WP_001579774 | IncI1-type conjugal transfer protein TraX | - |
| LMH53_RS29130 (LMH53_29130) | 59145..60347 | - | 1203 | WP_001189159 | IncI1-type conjugal transfer protein TraW | traW |
| LMH53_RS29135 (LMH53_29135) | 60314..60928 | - | 615 | WP_000337394 | IncI1-type conjugal transfer protein TraV | traV |
| LMH53_RS29140 (LMH53_29140) | 60928..63972 | - | 3045 | WP_001024752 | IncI1-type conjugal transfer protein TraU | traU |
| LMH53_RS29145 (LMH53_29145) | 64062..64862 | - | 801 | WP_001164788 | IncI1-type conjugal transfer protein TraT | traT |
| LMH53_RS29150 (LMH53_29150) | 64846..65034 | - | 189 | WP_001277255 | putative conjugal transfer protein TraS | - |
| LMH53_RS29155 (LMH53_29155) | 65098..65502 | - | 405 | WP_001579770 | DUF6750 family protein | traR |
| LMH53_RS29160 (LMH53_29160) | 65553..66080 | - | 528 | WP_001055569 | conjugal transfer protein TraQ | traQ |
| LMH53_RS29165 (LMH53_29165) | 66080..66784 | - | 705 | WP_000801920 | IncI1-type conjugal transfer protein TraP | traP |
| LMH53_RS29170 (LMH53_29170) | 66784..68073 | - | 1290 | WP_001271997 | conjugal transfer protein TraO | traO |
| LMH53_RS29175 (LMH53_29175) | 68076..69059 | - | 984 | WP_001579769 | IncI1-type conjugal transfer protein TraN | traN |
| LMH53_RS29180 (LMH53_29180) | 69070..69762 | - | 693 | WP_000138552 | DotI/IcmL family type IV secretion protein | traM |
| LMH53_RS29185 (LMH53_29185) | 69759..70106 | - | 348 | WP_001055900 | conjugal transfer protein | traL |
| LMH53_RS29190 (LMH53_29190) | 70124..73891 | - | 3768 | WP_001579768 | LPD7 domain-containing protein | - |
| LMH53_RS29195 (LMH53_29195) | 73981..74532 | - | 552 | WP_000014584 | phospholipase D family protein | - |
| LMH53_RS29200 (LMH53_29200) | 74547..74837 | - | 291 | WP_001372180 | hypothetical protein | traK |
| LMH53_RS29205 (LMH53_29205) | 74834..75982 | - | 1149 | WP_001024972 | plasmid transfer ATPase TraJ | virB11 |
| LMH53_RS29210 (LMH53_29210) | 75979..76797 | - | 819 | WP_000646097 | IncI1-type conjugal transfer lipoprotein TraI | traI |
| LMH53_RS29215 (LMH53_29215) | 76794..77252 | - | 459 | WP_001079808 | IncI1-type conjugal transfer lipoprotein TraH | - |
| LMH53_RS29220 (LMH53_29220) | 77647..78231 | - | 585 | WP_001579766 | histidine phosphatase family protein | - |
| LMH53_RS29225 (LMH53_29225) | 78291..79493 | - | 1203 | WP_000976353 | conjugal transfer protein TraF | - |
| LMH53_RS29230 (LMH53_29230) | 79579..80403 | - | 825 | WP_001238929 | conjugal transfer protein TraE | traE |
| LMH53_RS29235 (LMH53_29235) | 80554..81708 | - | 1155 | WP_001139958 | site-specific integrase | - |
| LMH53_RS29240 (LMH53_29240) | 83474..84766 | - | 1293 | WP_001417545 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| LMH53_RS29245 (LMH53_29245) | 84766..85422 | - | 657 | WP_001193553 | prepilin peptidase | - |
| LMH53_RS29250 (LMH53_29250) | 85407..85967 | - | 561 | WP_000014116 | lytic transglycosylase domain-containing protein | virB1 |
| LMH53_RS29255 (LMH53_29255) | 85977..86591 | - | 615 | WP_094819134 | type 4 pilus major pilin | - |
| LMH53_RS29260 (LMH53_29260) | 86609..87706 | - | 1098 | WP_001208805 | type II secretion system F family protein | - |
| LMH53_RS29265 (LMH53_29265) | 87719..89272 | - | 1554 | WP_001579763 | ATPase, T2SS/T4P/T4SS family | virB11 |
| LMH53_RS29270 (LMH53_29270) | 89283..89735 | - | 453 | WP_001247334 | type IV pilus biogenesis protein PilP | - |
| LMH53_RS29275 (LMH53_29275) | 89722..91017 | - | 1296 | WP_000752772 | type 4b pilus protein PilO2 | - |
| LMH53_RS29280 (LMH53_29280) | 91010..92692 | - | 1683 | WP_000748143 | PilN family type IVB pilus formation outer membrane protein | - |
| LMH53_RS29285 (LMH53_29285) | 92706..93143 | - | 438 | WP_000539807 | type IV pilus biogenesis protein PilM | - |
| LMH53_RS29290 (LMH53_29290) | 93143..94210 | - | 1068 | WP_001302629 | type IV pilus biogenesis lipoprotein PilL | - |