T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 39853..48851
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LL272_RS28340 (LL272_28340) | 35825..36259 | + | 435 | WP_000845953 | conjugation system SOS inhibitor PsiB | - |
| LL272_RS28345 (LL272_28345) | 36256..36975 | + | 720 | WP_001276217 | plasmid SOS inhibition protein A | - |
| LL272_RS28350 (LL272_28350) | 37197..37346 | + | 150 | Protein_49 | plasmid maintenance protein Mok | - |
| LL272_RS28355 (LL272_28355) | 37288..37413 | + | 126 | WP_001372321 | type I toxin-antitoxin system Hok family toxin | - |
| LL272_RS28360 (LL272_28360) | 37732..38028 | - | 297 | Protein_51 | hypothetical protein | - |
| LL272_RS28365 (LL272_28365) | 38328..38624 | + | 297 | WP_001272251 | hypothetical protein | - |
| LL272_RS28370 (LL272_28370) | 38735..39556 | + | 822 | WP_001234445 | DUF932 domain-containing protein | - |
| LL272_RS28375 (LL272_28375) | 39853..40500 | - | 648 | WP_015059008 | transglycosylase SLT domain-containing protein | virB1 |
| LL272_RS28380 (LL272_28380) | 40777..41160 | + | 384 | WP_000124981 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| LL272_RS28385 (LL272_28385) | 41351..42037 | + | 687 | WP_015059009 | PAS domain-containing protein | - |
| LL272_RS28390 (LL272_28390) | 42131..42358 | + | 228 | WP_001254386 | conjugal transfer relaxosome protein TraY | - |
| LL272_RS28395 (LL272_28395) | 42392..42757 | + | 366 | WP_021519752 | type IV conjugative transfer system pilin TraA | - |
| LL272_RS28400 (LL272_28400) | 42772..43083 | + | 312 | WP_000012106 | type IV conjugative transfer system protein TraL | traL |
| LL272_RS28405 (LL272_28405) | 43105..43671 | + | 567 | WP_000399794 | type IV conjugative transfer system protein TraE | traE |
| LL272_RS28410 (LL272_28410) | 43658..44386 | + | 729 | WP_001230787 | type-F conjugative transfer system secretin TraK | traK |
| LL272_RS28415 (LL272_28415) | 44386..45813 | + | 1428 | WP_032297072 | F-type conjugal transfer pilus assembly protein TraB | traB |
| LL272_RS28420 (LL272_28420) | 45803..46393 | + | 591 | WP_000002778 | conjugal transfer pilus-stabilizing protein TraP | - |
| LL272_RS28425 (LL272_28425) | 46380..46577 | + | 198 | WP_001324648 | conjugal transfer protein TrbD | - |
| LL272_RS28430 (LL272_28430) | 46589..46840 | + | 252 | WP_001038341 | conjugal transfer protein TrbG | - |
| LL272_RS28435 (LL272_28435) | 46837..47352 | + | 516 | WP_062955122 | type IV conjugative transfer system lipoprotein TraV | traV |
| LL272_RS28440 (LL272_28440) | 47487..47708 | + | 222 | WP_001278692 | conjugal transfer protein TraR | - |
| LL272_RS28445 (LL272_28445) | 47868..48800 | + | 933 | Protein_68 | TraC family protein | - |
| LL272_RS28450 (LL272_28450) | 48863..49567 | + | 705 | WP_001067855 | IS6-like element IS26 family transposase | - |
| LL272_RS28455 (LL272_28455) | 49621..49944 | - | 324 | Protein_70 | class II aldolase/adducin family protein | - |
| LL272_RS28460 (LL272_28460) | 49937..51189 | - | 1253 | Protein_71 | 3-oxo-tetronate kinase | - |
| LL272_RS28465 (LL272_28465) | 51201..52103 | - | 903 | WP_002903955 | L-threonate dehydrogenase | - |
| LL272_RS28470 (LL272_28470) | 52365..53126 | + | 762 | WP_002210513 | DeoR/GlpR family DNA-binding transcription regulator | - |