T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 45239..54329
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| J9B04_RS00335 (J9B04_000335) | 41270..41503 | - | 234 | WP_001191890 | hypothetical protein | - |
| J9B04_RS00340 (J9B04_000340) | 41485..42102 | - | 618 | WP_001249395 | hypothetical protein | - |
| J9B04_RS00345 (J9B04_000345) | 42270..45242 | + | 2973 | WP_001326173 | MobH family relaxase | - |
| J9B04_RS00350 (J9B04_000350) | 45239..47104 | + | 1866 | WP_000178857 | conjugative transfer system coupling protein TraD | virb4 |
| J9B04_RS00355 (J9B04_000355) | 47115..47699 | + | 585 | WP_000332868 | hypothetical protein | - |
| J9B04_RS00360 (J9B04_000360) | 47656..48285 | + | 630 | WP_000743449 | DUF4400 domain-containing protein | tfc7 |
| J9B04_RS00365 (J9B04_000365) | 48295..48741 | + | 447 | WP_000122507 | hypothetical protein | - |
| J9B04_RS00370 (J9B04_000370) | 48751..49128 | + | 378 | WP_000869297 | hypothetical protein | - |
| J9B04_RS00375 (J9B04_000375) | 49128..49790 | + | 663 | WP_001231464 | hypothetical protein | - |
| J9B04_RS00380 (J9B04_000380) | 49971..50114 | + | 144 | WP_001275801 | hypothetical protein | - |
| J9B04_RS00385 (J9B04_000385) | 50126..50491 | + | 366 | WP_001052530 | hypothetical protein | - |
| J9B04_RS00390 (J9B04_000390) | 50636..50917 | + | 282 | WP_000805625 | type IV conjugative transfer system protein TraL | traL |
| J9B04_RS00395 (J9B04_000395) | 50914..51540 | + | 627 | WP_001049717 | TraE/TraK family type IV conjugative transfer system protein | traE |
| J9B04_RS00400 (J9B04_000400) | 51524..52441 | + | 918 | WP_000794249 | type-F conjugative transfer system secretin TraK | traK |
| J9B04_RS00405 (J9B04_000405) | 52441..53754 | + | 1314 | WP_024131605 | TraB/VirB10 family protein | traB |
| J9B04_RS00410 (J9B04_000410) | 53751..54329 | + | 579 | WP_000793435 | type IV conjugative transfer system lipoprotein TraV | traV |
| J9B04_RS00415 (J9B04_000415) | 54333..54725 | + | 393 | WP_000479535 | TraA family conjugative transfer protein | - |
| J9B04_RS00420 (J9B04_000420) | 55010..56182 | + | 1173 | Protein_84 | IS1380-like element ISEcp1 family transposase | - |
| J9B04_RS00425 (J9B04_000425) | 56288..57475 | + | 1188 | WP_080399009 | IS4 family transposase | - |
| J9B04_RS00430 (J9B04_000430) | 57930..59075 | + | 1146 | WP_015056382 | class C beta-lactamase CMY-4 | - |