T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 58919..101238
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LI65_RS23570 (LI65_023765) | 54148..54333 | - | 186 | Protein_67 | integrase core domain-containing protein | - |
| LI65_RS23575 (LI65_023770) | 54429..54959 | - | 531 | WP_000043569 | hypothetical protein | - |
| LI65_RS23580 (LI65_023775) | 55241..56146 | - | 906 | WP_023093368 | LysR family transcriptional regulator | - |
| LI65_RS23585 (LI65_023780) | 56452..58449 | + | 1998 | WP_001163195 | IncP-type conjugal transfer protein TraG | - |
| LI65_RS23590 (LI65_023785) | 58446..58922 | + | 477 | WP_000085131 | ribbon-helix-helix protein, CopG family | - |
| LI65_RS23595 (LI65_023790) | 58919..59989 | + | 1071 | WP_023093367 | P-type conjugative transfer ATPase TrbB | virB11 |
| LI65_RS23600 (LI65_023795) | 59986..60372 | + | 387 | WP_000150010 | TrbC/VirB2 family protein | virB2 |
| LI65_RS23605 (LI65_023800) | 60369..60638 | + | 270 | WP_003092280 | VirB3 family type IV secretion system protein | virB3 |
| LI65_RS23610 (LI65_023805) | 60651..63101 | + | 2451 | WP_000933135 | conjugal transfer protein TrbE | virb4 |
| LI65_RS23615 (LI65_023810) | 63098..63841 | + | 744 | WP_003092277 | P-type conjugative transfer protein TrbJ | virB5 |
| LI65_RS23620 (LI65_023815) | 63854..64180 | + | 327 | WP_014603538 | hypothetical protein | - |
| LI65_RS23625 (LI65_023820) | 64177..65544 | + | 1368 | WP_001000746 | P-type conjugative transfer protein TrbL | virB6 |
| LI65_RS23630 (LI65_023825) | 65563..66267 | + | 705 | WP_001211312 | conjugal transfer protein TrbF | virB8 |
| LI65_RS23635 (LI65_023830) | 66264..67256 | + | 993 | WP_000776560 | P-type conjugative transfer protein TrbG | virB9 |
| LI65_RS23640 (LI65_023835) | 67259..68539 | + | 1281 | WP_003092274 | TrbI/VirB10 family protein | virB10 |
| LI65_RS23645 (LI65_023840) | 68536..68781 | + | 246 | WP_000108283 | DUF2274 domain-containing protein | - |
| LI65_RS23650 (LI65_023845) | 69119..69535 | + | 417 | WP_012766321 | hypothetical protein | - |
| LI65_RS23655 (LI65_023850) | 69573..69974 | - | 402 | WP_039272428 | hypothetical protein | - |
| LI65_RS23660 (LI65_023855) | 69985..72174 | - | 2190 | WP_039272426 | DNA topoisomerase 3 | - |
| LI65_RS23665 (LI65_023860) | 72174..72407 | - | 234 | WP_039272424 | hypothetical protein | - |
| LI65_RS23670 (LI65_023865) | 72389..73006 | - | 618 | WP_012766323 | hypothetical protein | - |
| LI65_RS23675 (LI65_023870) | 73174..76137 | + | 2964 | WP_000909947 | MobH family relaxase | - |
| LI65_RS23680 (LI65_023875) | 76134..77999 | + | 1866 | WP_000178858 | conjugative transfer system coupling protein TraD | virb4 |
| LI65_RS23685 (LI65_023880) | 78049..78594 | + | 546 | WP_023356350 | hypothetical protein | - |
| LI65_RS23690 (LI65_023885) | 78551..79180 | + | 630 | WP_000743448 | DUF4400 domain-containing protein | tfc7 |
| LI65_RS23695 (LI65_023890) | 79191..79637 | + | 447 | WP_039272421 | hypothetical protein | - |
| LI65_RS23700 (LI65_023895) | 79647..80024 | + | 378 | WP_000869260 | hypothetical protein | - |
| LI65_RS23705 (LI65_023900) | 80024..80686 | + | 663 | WP_039272419 | hypothetical protein | - |
| LI65_RS27980 | 80865..81008 | + | 144 | WP_168199038 | hypothetical protein | - |
| LI65_RS23710 (LI65_023905) | 81021..81368 | + | 348 | WP_039272417 | hypothetical protein | - |
| LI65_RS23715 (LI65_023910) | 81511..81792 | + | 282 | WP_000805626 | type IV conjugative transfer system protein TraL | traL |
| LI65_RS23720 (LI65_023915) | 81789..82415 | + | 627 | WP_039272415 | TraE/TraK family type IV conjugative transfer system protein | traE |
| LI65_RS23725 (LI65_023920) | 82399..83316 | + | 918 | WP_012766326 | type-F conjugative transfer system secretin TraK | traK |
| LI65_RS23730 (LI65_023925) | 83313..84629 | + | 1317 | WP_039272412 | TraB/VirB10 family protein | traB |
| LI65_RS23735 (LI65_023930) | 84626..85204 | + | 579 | WP_039272410 | type IV conjugative transfer system lipoprotein TraV | traV |
| LI65_RS23740 (LI65_023935) | 85208..85600 | + | 393 | WP_012766327 | TraA family conjugative transfer protein | - |
| LI65_RS23745 (LI65_023940) | 85801..91287 | + | 5487 | WP_039272407 | Ig-like domain-containing protein | - |
| LI65_RS23750 (LI65_023945) | 91436..92143 | + | 708 | WP_001259344 | DsbC family protein | - |
| LI65_RS23755 (LI65_023950) | 92140..94587 | + | 2448 | WP_051479468 | type IV secretion system protein TraC | virb4 |
| LI65_RS23760 (LI65_023955) | 94602..94919 | + | 318 | WP_000364398 | hypothetical protein | - |
| LI65_RS23765 (LI65_023960) | 94916..95446 | + | 531 | WP_000672456 | S26 family signal peptidase | - |
| LI65_RS23770 (LI65_023965) | 95409..96677 | + | 1269 | WP_039272404 | TrbC family F-type conjugative pilus assembly protein | traW |
| LI65_RS23775 (LI65_023970) | 96674..97351 | + | 678 | WP_039272402 | EAL domain-containing protein | - |
| LI65_RS23780 (LI65_023975) | 97345..98349 | + | 1005 | WP_000911304 | TraU family protein | traU |
| LI65_RS23785 (LI65_023980) | 98500..101238 | + | 2739 | WP_039272401 | conjugal transfer mating pair stabilization protein TraN | traN |
| LI65_RS23790 (LI65_023985) | 101277..102137 | - | 861 | WP_000679674 | hypothetical protein | - |
| LI65_RS23795 (LI65_023990) | 102249..102899 | - | 651 | WP_000796641 | hypothetical protein | - |
| LI65_RS23800 (LI65_023995) | 103191..103511 | + | 321 | WP_012766334 | hypothetical protein | - |
| LI65_RS23805 (LI65_024000) | 103822..104007 | + | 186 | WP_001186892 | hypothetical protein | - |
| LI65_RS23810 (LI65_024005) | 104228..105196 | + | 969 | WP_001553257 | AAA family ATPase | - |
| LI65_RS23815 (LI65_024010) | 105208..106113 | + | 906 | WP_039272396 | hypothetical protein | - |