T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 61636..90633
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L7U69_RS00325 (NHBFNDBA_00063) | 56915..61636 | - | 4722 | WP_348983986 | conjugative transfer relaxase/helicase TraI | - |
| L7U69_RS00330 (NHBFNDBA_00064) | 61636..63948 | - | 2313 | WP_032495268 | type IV conjugative transfer system coupling protein TraD | virb4 |
| L7U69_RS00335 (NHBFNDBA_00065) | 64077..64766 | - | 690 | WP_004198206 | hypothetical protein | - |
| L7U69_RS00340 (NHBFNDBA_00066) | 64958..65689 | - | 732 | WP_004152622 | conjugal transfer complement resistance protein TraT | - |
| L7U69_RS00345 (NHBFNDBA_00067) | 65873..66421 | - | 549 | WP_004152623 | conjugal transfer entry exclusion protein TraS | - |
| L7U69_RS00350 (NHBFNDBA_00068) | 66434..69283 | - | 2850 | WP_004152624 | conjugal transfer mating-pair stabilization protein TraG | traG |
| L7U69_RS00355 (NHBFNDBA_00069) | 69283..70662 | - | 1380 | WP_004165169 | conjugal transfer pilus assembly protein TraH | traH |
| L7U69_RS00360 (NHBFNDBA_00070) | 70640..71083 | - | 444 | WP_004152679 | F-type conjugal transfer protein TrbF | - |
| L7U69_RS00365 (NHBFNDBA_00071) | 71129..71686 | - | 558 | WP_004152678 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| L7U69_RS00370 (NHBFNDBA_00072) | 71658..71897 | - | 240 | WP_004144400 | type-F conjugative transfer system pilin chaperone TraQ | - |
| L7U69_RS00375 (NHBFNDBA_00073) | 71908..72660 | - | 753 | WP_004152677 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| L7U69_RS00380 (NHBFNDBA_00074) | 72681..73007 | - | 327 | WP_004152676 | hypothetical protein | - |
| L7U69_RS00385 (NHBFNDBA_00075) | 73020..73268 | - | 249 | WP_004152675 | hypothetical protein | - |
| L7U69_RS00390 (NHBFNDBA_00076) | 73246..73500 | - | 255 | WP_004152674 | conjugal transfer protein TrbE | - |
| L7U69_RS00395 (NHBFNDBA_00077) | 73532..75487 | - | 1956 | WP_004152673 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| L7U69_RS00400 (NHBFNDBA_00078) | 75546..76184 | - | 639 | WP_004152672 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| L7U69_RS00405 (NHBFNDBA_00079) | 76197..77186 | - | 990 | WP_011977785 | conjugal transfer pilus assembly protein TraU | traU |
| L7U69_RS00410 (NHBFNDBA_00080) | 77183..77572 | - | 390 | WP_004152508 | hypothetical protein | - |
| L7U69_RS00415 (NHBFNDBA_00081) | 77614..78240 | - | 627 | WP_004152507 | type-F conjugative transfer system protein TraW | traW |
| L7U69_RS00420 (NHBFNDBA_00082) | 78240..78629 | - | 390 | WP_004152506 | type-F conjugative transfer system protein TrbI | - |
| L7U69_RS00425 (NHBFNDBA_00083) | 78629..81268 | - | 2640 | WP_004152505 | type IV secretion system protein TraC | virb4 |
| L7U69_RS00430 (NHBFNDBA_00084) | 81340..81738 | - | 399 | WP_011977783 | hypothetical protein | - |
| L7U69_RS00435 | 81746..82135 | - | 390 | WP_004153076 | hypothetical protein | - |
| L7U69_RS00440 | 82178..82582 | - | 405 | WP_004152503 | hypothetical protein | - |
| L7U69_RS00445 (NHBFNDBA_00086) | 82649..82960 | - | 312 | WP_004152502 | hypothetical protein | - |
| L7U69_RS00450 | 82961..83179 | - | 219 | WP_004152501 | hypothetical protein | - |
| L7U69_RS00455 (NHBFNDBA_00087) | 83285..83695 | - | 411 | WP_004152499 | hypothetical protein | - |
| L7U69_RS00460 (NHBFNDBA_00088) | 83827..84411 | - | 585 | WP_004161368 | type IV conjugative transfer system lipoprotein TraV | traV |
| L7U69_RS00465 (NHBFNDBA_00089) | 84525..85949 | - | 1425 | WP_004155033 | F-type conjugal transfer pilus assembly protein TraB | traB |
| L7U69_RS00470 (NHBFNDBA_00090) | 85949..86689 | - | 741 | WP_004152497 | type-F conjugative transfer system secretin TraK | traK |
| L7U69_RS00475 (NHBFNDBA_00091) | 86676..87242 | - | 567 | WP_004144423 | type IV conjugative transfer system protein TraE | traE |
| L7U69_RS00480 (NHBFNDBA_00092) | 87262..87567 | - | 306 | WP_004144424 | type IV conjugative transfer system protein TraL | traL |
| L7U69_RS00485 (NHBFNDBA_00093) | 87581..87949 | - | 369 | WP_004152496 | type IV conjugative transfer system pilin TraA | - |
| L7U69_RS00490 (NHBFNDBA_00094) | 88003..88389 | - | 387 | WP_004152495 | TraY domain-containing protein | - |
| L7U69_RS00495 (NHBFNDBA_00095) | 88468..89154 | - | 687 | WP_004152494 | transcriptional regulator TraJ family protein | - |
| L7U69_RS00500 (NHBFNDBA_00096) | 89328..89726 | - | 399 | WP_004152493 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| L7U69_RS00505 (NHBFNDBA_00097) | 90148..90633 | + | 486 | WP_001568108 | transglycosylase SLT domain-containing protein | virB1 |
| L7U69_RS00510 | 90666..90995 | - | 330 | WP_011977736 | DUF5983 family protein | - |
| L7U69_RS00515 (NHBFNDBA_00098) | 91028..91849 | - | 822 | WP_004152492 | DUF932 domain-containing protein | - |
| L7U69_RS00520 (NHBFNDBA_00099) | 92669..93502 | - | 834 | WP_004152751 | N-6 DNA methylase | - |
| L7U69_RS00525 (NHBFNDBA_00100) | 93553..93699 | - | 147 | WP_004152750 | hypothetical protein | - |
| L7U69_RS00530 (NHBFNDBA_00101) | 93794..94141 | - | 348 | WP_004152749 | hypothetical protein | - |
| L7U69_RS00535 (NHBFNDBA_00102) | 94198..94551 | - | 354 | WP_004152748 | hypothetical protein | - |
| L7U69_RS00540 (NHBFNDBA_00103) | 95181..95531 | - | 351 | WP_004153414 | hypothetical protein | - |