T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 47740..89656
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MYB88_RS24825 (MYB88_24820) | 45459..47759 | - | 2301 | WP_087526032 | F-type conjugative transfer protein TrbC | - |
| MYB88_RS24830 (MYB88_24825) | 47740..48858 | - | 1119 | WP_087526031 | DsbC family protein | trbB |
| MYB88_RS24835 (MYB88_24830) | 48855..50126 | - | 1272 | WP_087526030 | IncI1-type conjugal transfer protein TrbA | trbA |
| MYB88_RS25580 | 50429..50512 | + | 84 | WP_271298668 | DinQ-like type I toxin DqlB | - |
| MYB88_RS24840 (MYB88_24835) | 50575..50751 | - | 177 | WP_032172741 | hypothetical protein | - |
| MYB88_RS24845 (MYB88_24840) | 50902..51369 | - | 468 | WP_000598962 | thermonuclease family protein | - |
| MYB88_RS24850 (MYB88_24845) | 51528..52151 | + | 624 | WP_001155252 | helix-turn-helix domain-containing protein | - |
| MYB88_RS24855 (MYB88_24850) | 52349..52564 | - | 216 | WP_000266543 | hypothetical protein | - |
| MYB88_RS24860 (MYB88_24855) | 52568..52936 | - | 369 | WP_001302696 | hypothetical protein | - |
| MYB88_RS24865 (MYB88_24860) | 52948..53139 | - | 192 | WP_000751583 | hypothetical protein | - |
| MYB88_RS24870 (MYB88_24865) | 53236..53478 | - | 243 | WP_000650933 | hypothetical protein | - |
| MYB88_RS24875 (MYB88_24870) | 53807..53959 | + | 153 | WP_021532728 | Hok/Gef family protein | - |
| MYB88_RS24880 (MYB88_24875) | 54528..54680 | + | 153 | WP_001536636 | Hok/Gef family protein | - |
| MYB88_RS24885 (MYB88_24880) | 54994..55125 | - | 132 | Protein_71 | ethanolamine utilization protein EutE | - |
| MYB88_RS24890 (MYB88_24885) | 55220..55429 | + | 210 | WP_000062946 | HEAT repeat domain-containing protein | - |
| MYB88_RS24895 (MYB88_24890) | 55494..56147 | - | 654 | WP_087526029 | plasmid IncI1-type surface exclusion protein ExcA | - |
| MYB88_RS24900 (MYB88_24895) | 56236..58401 | - | 2166 | WP_130565199 | DotA/TraY family protein | traY |
| MYB88_RS24905 (MYB88_24900) | 58474..59043 | - | 570 | WP_001204060 | conjugal transfer protein TraX | - |
| MYB88_RS24910 (MYB88_24905) | 59040..60245 | - | 1206 | WP_072643639 | conjugal transfer protein TraW | traW |
| MYB88_RS24915 (MYB88_24910) | 60203..60823 | - | 621 | WP_072643640 | conjugal transfer protein TraV | traV |
| MYB88_RS24920 (MYB88_24915) | 60823..63867 | - | 3045 | WP_087526027 | conjugal transfer protein | traU |
| MYB88_RS24925 (MYB88_24920) | 64353..64778 | - | 426 | WP_165410384 | hypothetical protein | - |
| MYB88_RS24930 (MYB88_24925) | 64846..65664 | - | 819 | WP_072645885 | conjugal transfer protein TraT | traT |
| MYB88_RS24935 (MYB88_24930) | 65657..65830 | - | 174 | WP_087526026 | TraS protein | - |
| MYB88_RS24940 (MYB88_24935) | 65887..66285 | - | 399 | WP_029391936 | DUF6750 family protein | traR |
| MYB88_RS24945 (MYB88_24940) | 66332..66862 | - | 531 | WP_000987022 | conjugal transfer protein TraQ | traQ |
| MYB88_RS24950 (MYB88_24945) | 66859..67572 | - | 714 | WP_000787009 | conjugal transfer protein TraP | traP |
| MYB88_RS24955 (MYB88_24950) | 67569..68900 | - | 1332 | WP_045145399 | conjugal transfer protein TraO | traO |
| MYB88_RS24960 (MYB88_24955) | 68904..69878 | - | 975 | WP_021532715 | DotH/IcmK family type IV secretion protein | traN |
| MYB88_RS24965 (MYB88_24960) | 69889..70584 | - | 696 | WP_045145396 | DotI/IcmL family type IV secretion protein | traM |
| MYB88_RS24970 (MYB88_24965) | 70596..70946 | - | 351 | WP_021532713 | hypothetical protein | traL |
| MYB88_RS24975 (MYB88_24970) | 70963..75024 | - | 4062 | WP_087526025 | LPD7 domain-containing protein | - |
| MYB88_RS24980 (MYB88_24975) | 75088..75378 | - | 291 | WP_000817799 | hypothetical protein | traK |
| MYB88_RS24985 (MYB88_24980) | 75375..76523 | - | 1149 | WP_000625247 | plasmid transfer ATPase TraJ | virB11 |
| MYB88_RS24990 (MYB88_24985) | 76507..77343 | - | 837 | WP_000848138 | type IV secretory system conjugative DNA transfer family protein | traI |
| MYB88_RS24995 (MYB88_24990) | 77340..77792 | - | 453 | WP_001081199 | DotD/TraH family lipoprotein | - |
| MYB88_RS25000 (MYB88_24995) | 77841..78011 | - | 171 | WP_001597011 | hypothetical protein | - |
| MYB88_RS25005 (MYB88_25000) | 78151..79350 | - | 1200 | WP_087526024 | conjugal transfer protein TraF | - |
| MYB88_RS25010 (MYB88_25005) | 79456..80277 | - | 822 | WP_001681675 | hypothetical protein | traE |
| MYB88_RS25015 (MYB88_25010) | 80551..80871 | + | 321 | WP_000695052 | hypothetical protein | - |
| MYB88_RS25020 (MYB88_25015) | 80963..81253 | - | 291 | WP_021532709 | hypothetical protein | - |
| MYB88_RS25025 (MYB88_25020) | 81295..82464 | - | 1170 | WP_021532708 | site-specific integrase | - |
| MYB88_RS25030 (MYB88_25025) | 82970..83329 | + | 360 | WP_247859143 | hypothetical protein | - |
| MYB88_RS25035 (MYB88_25030) | 83924..85261 | - | 1338 | WP_096984667 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| MYB88_RS25040 (MYB88_25035) | 85258..85965 | - | 708 | WP_153789788 | A24 family peptidase | - |
| MYB88_RS25045 (MYB88_25040) | 85925..86401 | - | 477 | WP_021532704 | lytic transglycosylase domain-containing protein | virB1 |
| MYB88_RS25050 (MYB88_25045) | 86460..86996 | - | 537 | WP_021532703 | type 4 pilus major pilin | - |
| MYB88_RS25055 (MYB88_25050) | 87046..88146 | - | 1101 | WP_072667218 | type II secretion system F family protein | - |
| MYB88_RS25060 (MYB88_25055) | 88148..89656 | - | 1509 | WP_021532701 | ATPase, T2SS/T4P/T4SS family | virB11 |
| MYB88_RS25065 (MYB88_25060) | 89753..90349 | - | 597 | WP_029391917 | hypothetical protein | - |
| MYB88_RS25070 (MYB88_25065) | 90445..90999 | - | 555 | WP_021532699 | hypothetical protein | - |
| MYB88_RS25075 (MYB88_25070) | 91048..91500 | - | 453 | WP_021532698 | type IV pilus biogenesis protein PilP | - |
| MYB88_RS25080 (MYB88_25075) | 91490..92785 | - | 1296 | WP_077250483 | type 4b pilus protein PilO2 | - |
| MYB88_RS25085 (MYB88_25080) | 92806..94425 | - | 1620 | WP_021532696 | PilN family type IVB pilus formation outer membrane protein | - |