T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 71620..98301
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MYB88_RS23580 (MYB88_23575) | 71620..73791 | - | 2172 | WP_247859140 | type IV conjugative transfer system coupling protein TraD | virb4 |
| MYB88_RS23585 (MYB88_23580) | 74044..74775 | - | 732 | WP_000850424 | conjugal transfer complement resistance protein TraT | - |
| MYB88_RS23590 (MYB88_23585) | 74807..75310 | - | 504 | WP_000605510 | hypothetical protein | - |
| MYB88_RS23595 (MYB88_23590) | 75325..78147 | - | 2823 | WP_001007026 | conjugal transfer mating-pair stabilization protein TraG | traG |
| MYB88_RS23600 (MYB88_23595) | 78144..79517 | - | 1374 | WP_001137358 | conjugal transfer pilus assembly protein TraH | traH |
| MYB88_RS23605 (MYB88_23600) | 79517..79879 | - | 363 | WP_001443292 | P-type conjugative transfer protein TrbJ | - |
| MYB88_RS23610 (MYB88_23605) | 79809..80354 | - | 546 | WP_000052618 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| MYB88_RS23615 (MYB88_23610) | 80341..80625 | - | 285 | WP_000624110 | type-F conjugative transfer system pilin chaperone TraQ | - |
| MYB88_RS23620 (MYB88_23615) | 80744..81091 | - | 348 | WP_072834356 | conjugal transfer protein TrbA | - |
| MYB88_RS23625 (MYB88_23620) | 81107..81850 | - | 744 | WP_001030378 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| MYB88_RS23630 (MYB88_23625) | 81843..82100 | - | 258 | WP_000864325 | conjugal transfer protein TrbE | - |
| MYB88_RS23635 (MYB88_23630) | 82127..83935 | - | 1809 | WP_000821821 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| MYB88_RS23640 (MYB88_23635) | 83932..84570 | - | 639 | WP_001104248 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| MYB88_RS23645 (MYB88_23640) | 84598..85050 | - | 453 | WP_000069427 | hypothetical protein | - |
| MYB88_RS23650 (MYB88_23645) | 85080..85541 | - | 462 | WP_000277845 | hypothetical protein | - |
| MYB88_RS23655 (MYB88_23650) | 85567..86559 | - | 993 | WP_000830839 | conjugal transfer pilus assembly protein TraU | traU |
| MYB88_RS23660 (MYB88_23655) | 86556..87188 | - | 633 | WP_001203745 | type-F conjugative transfer system protein TraW | traW |
| MYB88_RS23665 (MYB88_23660) | 87185..87571 | - | 387 | WP_000214084 | type-F conjugative transfer system protein TrbI | - |
| MYB88_RS23670 (MYB88_23665) | 87568..90195 | - | 2628 | WP_001064268 | type IV secretion system protein TraC | virb4 |
| MYB88_RS23675 (MYB88_23670) | 90355..90576 | - | 222 | WP_001278689 | conjugal transfer protein TraR | - |
| MYB88_RS23680 (MYB88_23675) | 90711..91226 | - | 516 | WP_000809906 | type IV conjugative transfer system lipoprotein TraV | traV |
| MYB88_RS23685 (MYB88_23680) | 91223..91474 | - | 252 | WP_001038341 | conjugal transfer protein TrbG | - |
| MYB88_RS23690 (MYB88_23685) | 91471..91788 | - | 318 | WP_001057292 | conjugal transfer protein TrbD | virb4 |
| MYB88_RS23695 (MYB88_23690) | 91785..92357 | - | 573 | WP_000002780 | conjugal transfer pilus-stabilizing protein TraP | - |
| MYB88_RS23700 (MYB88_23695) | 92347..93774 | - | 1428 | WP_000146685 | F-type conjugal transfer pilus assembly protein TraB | traB |
| MYB88_RS23705 (MYB88_23700) | 93774..94502 | - | 729 | WP_001230787 | type-F conjugative transfer system secretin TraK | traK |
| MYB88_RS23710 (MYB88_23705) | 94489..95055 | - | 567 | WP_000399792 | type IV conjugative transfer system protein TraE | traE |
| MYB88_RS23715 (MYB88_23710) | 95077..95388 | - | 312 | WP_000012106 | type IV conjugative transfer system protein TraL | traL |
| MYB88_RS23720 (MYB88_23715) | 95403..95762 | - | 360 | WP_000340272 | type IV conjugative transfer system pilin TraA | - |
| MYB88_RS23725 (MYB88_23720) | 95796..96023 | - | 228 | WP_001254386 | conjugal transfer relaxosome protein TraY | - |
| MYB88_RS23730 (MYB88_23725) | 96117..96803 | - | 687 | WP_000332484 | PAS domain-containing protein | - |
| MYB88_RS23735 (MYB88_23730) | 96994..97377 | - | 384 | WP_000124981 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| MYB88_RS23740 (MYB88_23735) | 97654..98301 | + | 648 | WP_000614936 | transglycosylase SLT domain-containing protein | virB1 |
| MYB88_RS23745 (MYB88_23740) | 98598..99419 | - | 822 | WP_001234469 | DUF932 domain-containing protein | - |
| MYB88_RS23750 (MYB88_23745) | 99541..99828 | - | 288 | WP_000107535 | hypothetical protein | - |
| MYB88_RS23755 (MYB88_23750) | 99853..100059 | - | 207 | WP_000547939 | hypothetical protein | - |
| MYB88_RS23760 (MYB88_23755) | 100129..100302 | + | 174 | Protein_119 | hypothetical protein | - |
| MYB88_RS23765 (MYB88_23760) | 101031..102698 | + | 1668 | WP_001762494 | group II intron reverse transcriptase/maturase | - |
| MYB88_RS23770 (MYB88_23765) | 102811..102987 | + | 177 | Protein_121 | pilus protein | - |