T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 26236..36561
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AM380_RS20890 (AM380_20855) | 21480..21686 | - | 207 | WP_001749967 | hypothetical protein | - |
| AM380_RS20900 (AM380_20865) | 21876..23375 | + | 1500 | WP_004118622 | IS21 family transposase | - |
| AM380_RS20905 (AM380_20870) | 23372..24127 | + | 756 | WP_038423655 | IS21-like element ISEc10 family helper ATPase IstB | - |
| AM380_RS20910 (AM380_20875) | 24176..24748 | - | 573 | WP_108657686 | restriction endonuclease | - |
| AM380_RS20915 (AM380_20880) | 24804..25115 | - | 312 | WP_001452736 | hypothetical protein | - |
| AM380_RS20920 (AM380_20885) | 25151..25465 | - | 315 | WP_001749965 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| AM380_RS20925 (AM380_20890) | 25462..25806 | - | 345 | WP_001749964 | hypothetical protein | - |
| AM380_RS20930 (AM380_20895) | 25822..26127 | - | 306 | WP_000960954 | H-NS family nucleoid-associated regulatory protein | - |
| AM380_RS20935 (AM380_20900) | 26236..26970 | + | 735 | WP_001749963 | lytic transglycosylase domain-containing protein | virB1 |
| AM380_RS20940 (AM380_20905) | 26979..27260 | + | 282 | WP_000440698 | transcriptional repressor KorA | - |
| AM380_RS20945 (AM380_20910) | 27270..27563 | + | 294 | WP_001749962 | hypothetical protein | virB2 |
| AM380_RS20950 (AM380_20915) | 27613..27930 | + | 318 | WP_000496058 | VirB3 family type IV secretion system protein | virB3 |
| AM380_RS20955 (AM380_20920) | 27930..30530 | + | 2601 | WP_001749961 | VirB4 family type IV secretion/conjugal transfer ATPase | virb4 |
| AM380_RS20960 (AM380_20925) | 30497..31261 | + | 765 | WP_013149461 | type IV secretion system protein | virB5 |
| AM380_RS20965 (AM380_20930) | 31269..31496 | + | 228 | WP_001749959 | IncN-type entry exclusion lipoprotein EexN | - |
| AM380_RS20970 (AM380_20935) | 31512..32552 | + | 1041 | WP_001749958 | type IV secretion system protein | virB6 |
| AM380_RS21815 (AM380_20940) | 32653..32781 | + | 129 | WP_071882546 | conjugal transfer protein TraN | - |
| AM380_RS20980 (AM380_20945) | 32771..33469 | + | 699 | WP_000646594 | type IV secretion system protein | virB8 |
| AM380_RS20985 (AM380_20950) | 33480..34364 | + | 885 | WP_000735066 | TrbG/VirB9 family P-type conjugative transfer protein | virB9 |
| AM380_RS20990 (AM380_20955) | 34364..35524 | + | 1161 | WP_000101710 | type IV secretion system protein VirB10 | virB10 |
| AM380_RS20995 (AM380_20960) | 35566..36561 | + | 996 | WP_000128596 | ATPase, T2SS/T4P/T4SS family | virB11 |
| AM380_RS21000 (AM380_20965) | 36561..37094 | + | 534 | WP_000792636 | phospholipase D family protein | - |
| AM380_RS21820 | 37268..37555 | - | 288 | Protein_49 | DUF6710 family protein | - |
| AM380_RS21010 (AM380_20975) | 37822..38001 | + | 180 | Protein_50 | helix-turn-helix domain-containing protein | - |
| AM380_RS21015 (AM380_20980) | 38066..38770 | + | 705 | WP_108657685 | IS6-like element IS26 family transposase | - |
| AM380_RS21025 (AM380_20990) | 38816..39238 | - | 423 | Protein_52 | alpha/beta hydrolase-fold protein | - |
| AM380_RS21030 (AM380_20995) | 39260..40369 | - | 1110 | WP_000842134 | S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase | - |