T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 1218..12439
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RK65_RS13910 (RK65_013910) | 1..824 | + | 824 | WP_047211911 | conjugative transfer protein TrsA | - |
| RK65_RS13915 (RK65_013915) | 841..1158 | + | 318 | WP_000591622 | CagC family type IV secretion system protein | - |
| RK65_RS13920 (RK65_013920) | 1218..1625 | + | 408 | WP_000110157 | hypothetical protein | trsC |
| RK65_RS13925 (RK65_013925) | 1612..2295 | + | 684 | WP_000979860 | TrsD/TraD family conjugative transfer protein | trsD |
| RK65_RS13930 (RK65_013930) | 2316..4328 | + | 2013 | WP_000874919 | DUF87 domain-containing protein | virb4 |
| RK65_RS13935 (RK65_013935) | 4340..5620 | + | 1281 | WP_000702361 | membrane protein | trsF |
| RK65_RS13940 (RK65_013940) | 5638..6714 | + | 1077 | WP_000269385 | CHAP domain-containing protein | trsG |
| RK65_RS13945 (RK65_013945) | 6724..7209 | + | 486 | WP_000735569 | TrsH/TraH family protein | - |
| RK65_RS13950 (RK65_013950) | 7225..9327 | + | 2103 | WP_001094109 | DNA topoisomerase III | - |
| RK65_RS13955 (RK65_013955) | 9343..9807 | + | 465 | WP_000715273 | hypothetical protein | trsJ |
| RK65_RS13960 (RK65_013960) | 9804..11444 | + | 1641 | WP_000209436 | VirD4-like conjugal transfer protein, CD1115 family | - |
| RK65_RS13965 (RK65_013965) | 11522..12439 | + | 918 | WP_000383804 | conjugal transfer protein TrbL family protein | trsL |
| RK65_RS13970 (RK65_013970) | 12456..12848 | + | 393 | WP_000608970 | single-stranded DNA-binding protein | - |
| RK65_RS14155 | 12905..13072 | + | 168 | WP_000869301 | hypothetical protein | - |
| RK65_RS13975 (RK65_013975) | 13110..13784 | + | 675 | WP_001105984 | IS6-like element IS257 family transposase | - |
| RK65_RS13985 (RK65_013985) | 14002..17076 | + | 3075 | WP_047211916 | mupirocin-resistant isoleucine--tRNA ligase MupA | - |