T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 1..27282
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QIU04_RS00035 (QIU04_00035) | 1..718 | + | 718 | WP_281441295 | type IV secretory system conjugative DNA transfer family protein | traI |
| QIU04_RS00040 (QIU04_00040) | 729..1892 | + | 1164 | WP_004187313 | plasmid transfer ATPase TraJ | virB11 |
| QIU04_RS00045 (QIU04_00045) | 1882..2142 | + | 261 | WP_004187310 | IcmT/TraK family protein | traK |
| QIU04_RS00050 (QIU04_00050) | 2167..5604 | + | 3438 | WP_015586048 | LPD7 domain-containing protein | - |
| QIU04_RS00055 (QIU04_00055) | 5570..6082 | + | 513 | WP_011091071 | hypothetical protein | traL |
| QIU04_RS00060 (QIU04_00060) | 6083..6295 | - | 213 | WP_305953721 | Hha/YmoA family nucleoid-associated regulatory protein | - |
| QIU04_RS00065 (QIU04_00065) | 6267..6677 | - | 411 | WP_004187465 | H-NS family nucleoid-associated regulatory protein | - |
| QIU04_RS00070 (QIU04_00070) | 6676..7458 | + | 783 | WP_015058941 | DotI/IcmL family type IV secretion protein | traM |
| QIU04_RS00075 (QIU04_00075) | 7467..8618 | + | 1152 | WP_004187471 | DotH/IcmK family type IV secretion protein | traN |
| QIU04_RS00080 (QIU04_00080) | 8630..9979 | + | 1350 | WP_004187474 | conjugal transfer protein TraO | traO |
| QIU04_RS00085 (QIU04_00085) | 9991..10695 | + | 705 | WP_015060002 | conjugal transfer protein TraP | traP |
| QIU04_RS00090 (QIU04_00090) | 10719..11249 | + | 531 | WP_004187478 | conjugal transfer protein TraQ | traQ |
| QIU04_RS00095 (QIU04_00095) | 11266..11655 | + | 390 | WP_004187479 | DUF6750 family protein | traR |
| QIU04_RS00100 (QIU04_00100) | 11701..12195 | + | 495 | WP_004187480 | hypothetical protein | - |
| QIU04_RS00105 (QIU04_00105) | 12192..15242 | + | 3051 | WP_004187482 | hypothetical protein | traU |
| QIU04_RS00110 (QIU04_00110) | 15239..16447 | + | 1209 | WP_011091082 | conjugal transfer protein TraW | traW |
| QIU04_RS00115 (QIU04_00115) | 16444..17040 | + | 597 | WP_015060003 | hypothetical protein | - |
| QIU04_RS00120 (QIU04_00120) | 17033..19228 | + | 2196 | WP_015062834 | DotA/TraY family protein | traY |
| QIU04_RS00125 (QIU04_00125) | 19266..19883 | + | 618 | WP_019725044 | hypothetical protein | - |
| QIU04_RS00130 (QIU04_00130) | 19952..20194 | + | 243 | WP_023893611 | IncL/M type plasmid replication protein RepC | - |
| QIU04_RS00135 (QIU04_00135) | 20478..21545 | + | 1068 | WP_019725043 | plasmid replication initiator RepA | - |
| QIU04_RS00140 (QIU04_00140) | 22768..22863 | + | 96 | WP_004206884 | DinQ-like type I toxin DqlB | - |
| QIU04_RS00145 (QIU04_00145) | 22914..25001 | - | 2088 | WP_004206885 | conjugal transfer protein TrbC | - |
| QIU04_RS00150 (QIU04_00150) | 25014..25964 | - | 951 | WP_004206886 | DsbC family protein | trbB |
| QIU04_RS00155 (QIU04_00155) | 25975..27282 | - | 1308 | WP_015059988 | hypothetical protein | trbA |
| QIU04_RS00160 (QIU04_00160) | 27282..27638 | - | 357 | WP_015586032 | lytic transglycosylase domain-containing protein | - |
| QIU04_RS00165 (QIU04_00165) | 27782..28132 | - | 351 | WP_124065455 | DUF1496 domain-containing protein | - |
| QIU04_RS00170 (QIU04_00170) | 28245..28679 | + | 435 | Protein_27 | CPBP family intramembrane glutamate endopeptidase | - |
| QIU04_RS00175 (QIU04_00175) | 28694..29900 | - | 1207 | Protein_28 | IS4-like element IS10A family transposase | - |
| QIU04_RS00185 (QIU04_00185) | 30813..31610 | + | 798 | WP_015059991 | OXA-48 family carbapenem-hydrolyzing class D beta-lactamase OXA-48 | - |