T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 177624..187208
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D4A92_RS22385 (D4A92_22415) | 172923..174137 | - | 1215 | WP_203020766 | plasmid replication protein RepC | - |
| D4A92_RS22390 (D4A92_22420) | 174301..175278 | - | 978 | WP_203020768 | plasmid partitioning protein RepB | - |
| D4A92_RS22395 (D4A92_22425) | 175353..176540 | - | 1188 | WP_203020770 | plasmid partitioning protein RepA | - |
| D4A92_RS22400 (D4A92_22430) | 176956..177627 | + | 672 | WP_203020772 | acyl-homoserine-lactone synthase | - |
| D4A92_RS22405 (D4A92_22435) | 177624..178574 | + | 951 | WP_203020774 | P-type conjugative transfer ATPase TrbB | virB11 |
| D4A92_RS22410 (D4A92_22440) | 178601..178969 | + | 369 | WP_246754165 | TrbC/VirB2 family protein | virB2 |
| D4A92_RS22415 (D4A92_22445) | 178969..179265 | + | 297 | WP_203020905 | conjugal transfer protein TrbD | virB3 |
| D4A92_RS22420 (D4A92_22450) | 179280..181730 | + | 2451 | WP_203020778 | VirB4 family type IV secretion/conjugal transfer ATPase | virb4 |
| D4A92_RS22425 (D4A92_22455) | 181765..182523 | + | 759 | WP_246754156 | P-type conjugative transfer protein TrbJ | virB5 |
| D4A92_RS22430 (D4A92_22460) | 182559..183761 | + | 1203 | WP_203020907 | P-type conjugative transfer protein TrbL | virB6 |
| D4A92_RS22435 (D4A92_22465) | 183761..184426 | + | 666 | WP_203020782 | conjugal transfer protein TrbF | virB8 |
| D4A92_RS22440 (D4A92_22470) | 184599..185330 | + | 732 | WP_246754157 | P-type conjugative transfer protein TrbG | virB9 |
| D4A92_RS22445 (D4A92_22475) | 185398..185874 | + | 477 | WP_203020784 | hypothetical protein | - |
| D4A92_RS22450 (D4A92_22480) | 185871..187208 | + | 1338 | WP_203020786 | IncP-type conjugal transfer protein TrbI | virB10 |
| D4A92_RS22455 (D4A92_22485) | 187313..188029 | - | 717 | WP_203020788 | autoinducer binding domain-containing protein | - |
| D4A92_RS22460 (D4A92_22490) | 188324..189148 | - | 825 | WP_203020790 | response regulator transcription factor | - |
| D4A92_RS22465 (D4A92_22495) | 189364..190146 | + | 783 | WP_203020793 | response regulator transcription factor | - |
| D4A92_RS22470 (D4A92_22500) | 190143..191534 | + | 1392 | WP_203020796 | amidohydrolase family protein | - |