T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 53361..69962
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LI63_RS01175 (LI63_01310) | 48729..48947 | + | 219 | WP_004187411 | hypothetical protein | - |
| LI63_RS01180 (LI63_01315) | 48950..49159 | + | 210 | WP_004187413 | hypothetical protein | - |
| LI63_RS01185 (LI63_01320) | 49282..50547 | - | 1266 | WP_024190314 | translesion error-prone DNA polymerase V subunit UmuC | - |
| LI63_RS01190 (LI63_01325) | 50535..50969 | - | 435 | WP_044068898 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| LI63_RS01195 (LI63_01330) | 51062..51427 | - | 366 | WP_020277900 | type II toxin-antitoxin system toxin endoribonuclease PemK-mt | - |
| LI63_RS26885 (LI63_01335) | 51396..51653 | - | 258 | WP_004187429 | type II toxin-antitoxin system antitoxin PemI | - |
| LI63_RS01205 (LI63_01340) | 51745..52398 | - | 654 | WP_004206890 | type II CAAX endopeptidase family protein | - |
| LI63_RS01210 (LI63_01345) | 52478..52861 | + | 384 | WP_004206889 | DUF1496 domain-containing protein | - |
| LI63_RS01215 (LI63_01350) | 53005..53361 | + | 357 | WP_015586032 | lytic transglycosylase domain-containing protein | - |
| LI63_RS01220 (LI63_01355) | 53361..54668 | + | 1308 | WP_015059988 | hypothetical protein | trbA |
| LI63_RS01225 (LI63_01360) | 54679..55629 | + | 951 | WP_004206886 | DsbC family protein | trbB |
| LI63_RS01230 (LI63_01365) | 55642..57729 | + | 2088 | WP_004206885 | conjugal transfer protein TrbC | - |
| LI63_RS27380 | 57780..57875 | - | 96 | WP_004206884 | DinQ-like type I toxin DqlB | - |
| LI63_RS01235 (LI63_01375) | 59102..60157 | - | 1056 | WP_021526650 | plasmid replication initiator RepA | - |
| LI63_RS01240 (LI63_01380) | 60454..60684 | - | 231 | WP_004187496 | IncL/M type plasmid replication protein RepC | - |
| LI63_RS01245 (LI63_01385) | 60758..61411 | - | 654 | WP_004206935 | hypothetical protein | - |
| LI63_RS01250 (LI63_01390) | 61414..63594 | - | 2181 | WP_004187492 | DotA/TraY family protein | traY |
| LI63_RS01255 (LI63_01395) | 63587..64237 | - | 651 | WP_004187488 | hypothetical protein | - |
| LI63_RS01260 (LI63_01400) | 64234..65442 | - | 1209 | WP_004187486 | conjugal transfer protein TraW | traW |
| LI63_RS01265 (LI63_01405) | 65439..68489 | - | 3051 | WP_011154474 | conjugative transfer protein | traU |
| LI63_RS01270 (LI63_01410) | 68486..68980 | - | 495 | WP_004187480 | hypothetical protein | - |
| LI63_RS01275 (LI63_01415) | 69026..69415 | - | 390 | WP_011154472 | DUF6750 family protein | traR |
| LI63_RS01280 (LI63_01420) | 69432..69962 | - | 531 | WP_004187478 | conjugal transfer protein TraQ | traQ |