T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 309113..331146
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HA463_RS37300 (HA463_37295) | 304475..304786 | + | 312 | WP_128408833 | DUF736 domain-containing protein | - |
| HA463_RS37305 (HA463_37300) | 305086..305247 | + | 162 | WP_018516739 | hypothetical protein | - |
| HA463_RS39685 (HA463_37305) | 305780..306088 | - | 309 | WP_128408835 | WGR domain-containing protein | - |
| HA463_RS37315 (HA463_37310) | 306532..306846 | + | 315 | WP_128408836 | hypothetical protein | - |
| HA463_RS37320 (HA463_37315) | 307078..307227 | - | 150 | Protein_294 | thermonuclease family protein | - |
| HA463_RS37325 (HA463_37320) | 307224..308301 | - | 1078 | Protein_295 | IS630 family transposase | - |
| HA463_RS37330 (HA463_37325) | 308371..308673 | - | 303 | Protein_296 | thermonuclease family protein | - |
| HA463_RS37335 (HA463_37330) | 309113..311047 | - | 1935 | WP_128409206 | Ti-type conjugative transfer system protein TraG | virb4 |
| HA463_RS37340 (HA463_37335) | 311034..311249 | - | 216 | WP_011654561 | type IV conjugative transfer system coupling protein TraD | - |
| HA463_RS37345 (HA463_37340) | 311254..311547 | - | 294 | WP_128409207 | conjugal transfer protein TraC | - |
| HA463_RS37350 (HA463_37345) | 311802..315128 | + | 3327 | WP_130784879 | Ti-type conjugative transfer relaxase TraA | - |
| HA463_RS37355 (HA463_37350) | 315176..315688 | + | 513 | WP_245458277 | conjugative transfer signal peptidase TraF | - |
| HA463_RS37360 (HA463_37355) | 315678..316844 | + | 1167 | WP_128408812 | conjugal transfer protein TraB | - |
| HA463_RS37365 (HA463_37360) | 316862..317482 | + | 621 | WP_128408811 | TraH family protein | virB1 |
| HA463_RS37370 (HA463_37365) | 317627..318342 | - | 716 | Protein_304 | Crp/Fnr family transcriptional regulator | - |
| HA463_RS37375 (HA463_37370) | 318699..319073 | - | 375 | WP_128408810 | DUF5615 family PIN-like protein | - |
| HA463_RS37380 (HA463_37375) | 319070..319702 | - | 633 | WP_128408809 | DUF433 domain-containing protein | - |
| HA463_RS37385 (HA463_37380) | 319816..320058 | - | 243 | WP_128408808 | helix-turn-helix transcriptional regulator | - |
| HA463_RS37390 (HA463_37385) | 320284..320625 | + | 342 | WP_128408807 | transcriptional repressor TraM | - |
| HA463_RS37395 (HA463_37390) | 320610..321314 | - | 705 | WP_128408806 | autoinducer binding domain-containing protein | - |
| HA463_RS37400 (HA463_37395) | 321623..322921 | - | 1299 | WP_128408805 | IncP-type conjugal transfer protein TrbI | virB10 |
| HA463_RS37405 (HA463_37400) | 322933..323373 | - | 441 | WP_128408804 | conjugal transfer protein TrbH | - |
| HA463_RS37410 (HA463_37405) | 323377..324189 | - | 813 | WP_128408803 | P-type conjugative transfer protein TrbG | virB9 |
| HA463_RS37415 (HA463_37410) | 324207..324869 | - | 663 | WP_128408802 | conjugal transfer protein TrbF | virB8 |
| HA463_RS37420 (HA463_37415) | 324890..326071 | - | 1182 | WP_128408801 | P-type conjugative transfer protein TrbL | virB6 |
| HA463_RS37425 (HA463_37420) | 326065..326265 | - | 201 | WP_128408800 | entry exclusion protein TrbK | - |
| HA463_RS37430 (HA463_37425) | 326262..327065 | - | 804 | WP_166481262 | P-type conjugative transfer protein TrbJ | virB5 |
| HA463_RS37435 (HA463_37430) | 327037..329493 | - | 2457 | WP_164015671 | conjugal transfer protein TrbE | virb4 |
| HA463_RS37440 (HA463_37435) | 329504..329803 | - | 300 | WP_027681723 | conjugal transfer protein TrbD | virB3 |
| HA463_RS37445 (HA463_37440) | 329796..330179 | - | 384 | WP_128408797 | TrbC/VirB2 family protein | virB2 |
| HA463_RS37450 (HA463_37445) | 330169..331146 | - | 978 | WP_128408796 | P-type conjugative transfer ATPase TrbB | virB11 |
| HA463_RS37455 (HA463_37450) | 331143..331781 | - | 639 | WP_063473646 | acyl-homoserine-lactone synthase | - |
| HA463_RS39330 | 332259..332471 | + | 213 | WP_245458276 | hypothetical protein | - |