T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 610..10518
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LI63_RS00845 (LI63_00965) | 610..1959 | - | 1350 | WP_004206932 | conjugal transfer protein TraO | traO |
| LI63_RS25080 (LI63_01605) | 1971..3122 | - | 1152 | WP_015062843 | DotH/IcmK family type IV secretion protein | traN |
| LI63_RS00860 (LI63_00975) | 3131..3844 | - | 714 | WP_223294958 | DotI/IcmL family type IV secretion protein | traM |
| LI63_RS00865 (LI63_00980) | 3912..4322 | + | 411 | WP_004187465 | H-NS family nucleoid-associated regulatory protein | - |
| LI63_RS25325 | 4351..4506 | + | 156 | WP_172693602 | Hha/YmoA family nucleoid-associated regulatory protein | - |
| LI63_RS00870 | 4507..5019 | - | 513 | WP_011091071 | hypothetical protein | traL |
| LI63_RS27135 | 4985..8290 | - | 3306 | WP_219818010 | LPD7 domain-containing protein | - |
| LI63_RS00880 (LI63_01010) | 8315..8575 | - | 261 | WP_004187310 | IcmT/TraK family protein | traK |
| LI63_RS00885 (LI63_01015) | 8565..9728 | - | 1164 | WP_004206926 | plasmid transfer ATPase TraJ | virB11 |
| LI63_RS00890 (LI63_01020) | 9739..10518 | - | 780 | WP_004187315 | type IV secretory system conjugative DNA transfer family protein | traI |
| LI63_RS00895 (LI63_01025) | 10515..11015 | - | 501 | WP_004206925 | DotD/TraH family lipoprotein | - |
| LI63_RS00900 (LI63_01030) | 11029..13008 | - | 1980 | WP_004206924 | TraI/MobA(P) family conjugative relaxase | - |
| LI63_RS00905 (LI63_01035) | 12995..13312 | - | 318 | WP_004206923 | plasmid mobilization protein MobA | - |
| LI63_RS00910 (LI63_01040) | 13588..13953 | + | 366 | WP_004206922 | hypothetical protein | - |
| LI63_RS00915 (LI63_01050) | 14454..14990 | - | 537 | WP_004206920 | hypothetical protein | - |
| LI63_RS00920 (LI63_01055) | 15123..15434 | - | 312 | WP_004187333 | hypothetical protein | - |