T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 178055..214197
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EXT34_RS23435 (EXT34_23890) | 173117..174184 | + | 1068 | WP_001360287 | type IV pilus biogenesis lipoprotein PilL | - |
| EXT34_RS23440 (EXT34_23895) | 174184..174621 | + | 438 | WP_000539807 | type IV pilus biogenesis protein PilM | - |
| EXT34_RS23445 (EXT34_23900) | 174635..176317 | + | 1683 | WP_000748143 | PilN family type IVB pilus formation outer membrane protein | - |
| EXT34_RS23450 (EXT34_23905) | 176310..177605 | + | 1296 | WP_001545757 | type 4b pilus protein PilO2 | - |
| EXT34_RS23455 (EXT34_23910) | 177592..178044 | + | 453 | WP_001247331 | type IV pilus biogenesis protein PilP | - |
| EXT34_RS23460 (EXT34_23915) | 178055..179608 | + | 1554 | WP_000362206 | ATPase, T2SS/T4P/T4SS family | virB11 |
| EXT34_RS23465 (EXT34_23920) | 179621..180706 | + | 1086 | WP_001208802 | type II secretion system F family protein | - |
| EXT34_RS23470 (EXT34_23925) | 180723..181337 | + | 615 | WP_000908226 | type 4 pilus major pilin | - |
| EXT34_RS23475 (EXT34_23930) | 181347..181907 | + | 561 | WP_000014005 | lytic transglycosylase domain-containing protein | virB1 |
| EXT34_RS23480 (EXT34_23935) | 181892..182548 | + | 657 | WP_001193549 | A24 family peptidase | - |
| EXT34_RS23485 (EXT34_23940) | 182548..183840 | + | 1293 | WP_001350014 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| EXT34_RS23490 (EXT34_23945) | 183896..184021 | - | 126 | Protein_175 | RNA-guided endonuclease TnpB family protein | - |
| EXT34_RS23495 (EXT34_23950) | 184229..185053 | + | 825 | WP_001238942 | conjugal transfer protein TraE | traE |
| EXT34_RS23500 (EXT34_23955) | 185139..186341 | + | 1203 | WP_000976348 | conjugal transfer protein TraF | - |
| EXT34_RS23505 (EXT34_23960) | 186401..186985 | + | 585 | WP_000977522 | histidine phosphatase family protein | - |
| EXT34_RS23510 (EXT34_23965) | 187380..187838 | + | 459 | WP_001079808 | IncI1-type conjugal transfer lipoprotein TraH | - |
| EXT34_RS23515 (EXT34_23970) | 187835..188653 | + | 819 | WP_000646097 | IncI1-type conjugal transfer lipoprotein TraI | traI |
| EXT34_RS23520 (EXT34_23975) | 188650..189798 | + | 1149 | WP_001024972 | plasmid transfer ATPase TraJ | virB11 |
| EXT34_RS23525 (EXT34_23980) | 189795..190085 | + | 291 | WP_001299214 | hypothetical protein | traK |
| EXT34_RS23530 (EXT34_23985) | 190100..190651 | + | 552 | WP_000014584 | phospholipase D family protein | - |
| EXT34_RS23535 (EXT34_23990) | 190741..194508 | + | 3768 | WP_001141542 | LPD7 domain-containing protein | - |
| EXT34_RS23540 (EXT34_23995) | 194526..194873 | + | 348 | WP_001055900 | conjugal transfer protein | traL |
| EXT34_RS23545 (EXT34_24000) | 194870..195562 | + | 693 | WP_000138552 | DotI/IcmL family type IV secretion protein | traM |
| EXT34_RS23550 (EXT34_24005) | 195573..196556 | + | 984 | WP_001191878 | IncI1-type conjugal transfer protein TraN | traN |
| EXT34_RS23555 (EXT34_24010) | 196559..197848 | + | 1290 | WP_001271997 | conjugal transfer protein TraO | traO |
| EXT34_RS23560 (EXT34_24015) | 197848..198552 | + | 705 | WP_000801920 | IncI1-type conjugal transfer protein TraP | traP |
| EXT34_RS23565 (EXT34_24020) | 198552..199079 | + | 528 | WP_001055569 | conjugal transfer protein TraQ | traQ |
| EXT34_RS23570 (EXT34_24025) | 199130..199534 | + | 405 | WP_000086961 | IncI1-type conjugal transfer protein TraR | traR |
| EXT34_RS23575 (EXT34_24030) | 199598..199786 | + | 189 | WP_001277255 | putative conjugal transfer protein TraS | - |
| EXT34_RS23580 (EXT34_24035) | 199770..200570 | + | 801 | WP_001164788 | IncI1-type conjugal transfer protein TraT | traT |
| EXT34_RS23585 (EXT34_24040) | 200660..203704 | + | 3045 | WP_001024780 | IncI1-type conjugal transfer protein TraU | traU |
| EXT34_RS23590 (EXT34_24045) | 203704..204318 | + | 615 | WP_000337400 | IncI1-type conjugal transfer protein TraV | traV |
| EXT34_RS23595 (EXT34_24050) | 204285..205487 | + | 1203 | WP_001189156 | IncI1-type conjugal transfer protein TraW | traW |
| EXT34_RS23600 (EXT34_24055) | 205516..206100 | + | 585 | WP_001037987 | IncI1-type conjugal transfer protein TraX | - |
| EXT34_RS23605 (EXT34_24060) | 206197..208365 | + | 2169 | WP_000698357 | DotA/TraY family protein | traY |
| EXT34_RS23610 (EXT34_24065) | 208439..209089 | + | 651 | WP_001178506 | plasmid IncI1-type surface exclusion protein ExcA | - |
| EXT34_RS23615 (EXT34_24070) | 209161..209370 | - | 210 | WP_000062603 | HEAT repeat domain-containing protein | - |
| EXT34_RS23620 | 209762..209938 | + | 177 | WP_001054904 | hypothetical protein | - |
| EXT34_RS24495 | 210003..210098 | - | 96 | WP_001303310 | DinQ-like type I toxin DqlB | - |
| EXT34_RS23625 (EXT34_24075) | 210730..211638 | + | 909 | WP_000055084 | hypothetical protein | - |
| EXT34_RS23630 (EXT34_24080) | 211900..213108 | + | 1209 | WP_000121273 | IncI1-type conjugal transfer protein TrbA | trbA |
| EXT34_RS23635 (EXT34_24085) | 213127..214197 | + | 1071 | WP_000151577 | IncI1-type conjugal transfer protein TrbB | trbB |
| EXT34_RS23640 (EXT34_24090) | 214190..216481 | + | 2292 | WP_001289276 | F-type conjugative transfer protein TrbC | - |