T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 181231..197179
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RLV_RS37905 (RLV_2194) | 179017..179769 | - | 753 | WP_104891314 | IS6-like element ISRle39A family transposase | - |
| RLV_RS37910 (RLV_2195) | 179928..180650 | - | 723 | WP_104891278 | response regulator | - |
| RLV_RS38435 | 180770..180970 | + | 201 | WP_131618399 | hypothetical protein | - |
| RLV_RS37915 (RLV_2197) | 181231..182232 | - | 1002 | WP_104891277 | P-type DNA transfer ATPase VirB11 | virB11 |
| RLV_RS37920 (RLV_2198) | 182229..183404 | - | 1176 | WP_104891313 | TrbI/VirB10 family protein | virB10 |
| RLV_RS37925 (RLV_2199) | 183604..184386 | - | 783 | WP_077988073 | TrbG/VirB9 family P-type conjugative transfer protein | virB9 |
| RLV_RS37930 (RLV_2200) | 184414..185088 | - | 675 | WP_077988072 | type IV secretion system protein | virB8 |
| RLV_RS37935 (RLV_2201) | 185181..186449 | - | 1269 | WP_104891304 | IS256 family transposase | - |
| RLV_RS37940 (RLV_2202) | 186552..186710 | + | 159 | Protein_190 | IS6 family transposase | - |
| RLV_RS37945 (RLV_2203) | 187042..187980 | + | 939 | WP_245461634 | lytic transglycosylase domain-containing protein | - |
| RLV_RS37950 (RLV_2204) | 187999..188310 | + | 312 | WP_077988068 | TrbC/VirB2 family protein | virB2 |
| RLV_RS37955 | 188394..188672 | + | 279 | WP_104891276 | VirB3 family type IV secretion system protein | virB3 |
| RLV_RS37960 (RLV_2205) | 188644..191025 | + | 2382 | WP_077988070 | DUF87 domain-containing protein | virb4 |
| RLV_RS37965 | 191156..191959 | + | 804 | WP_245315068 | type IV secretion system protein | - |
| RLV_RS37970 (RLV_2207) | 192000..193109 | + | 1110 | WP_245315069 | type IV secretion system protein | virB6 |
| RLV_RS37975 (RLV_2208) | 193322..193996 | + | 675 | WP_077988072 | type IV secretion system protein | virB8 |
| RLV_RS37980 (RLV_2209) | 194024..194806 | + | 783 | WP_077988073 | TrbG/VirB9 family P-type conjugative transfer protein | virB9 |
| RLV_RS37985 (RLV_2210) | 195006..196181 | + | 1176 | WP_104891313 | TrbI/VirB10 family protein | virB10 |
| RLV_RS37990 (RLV_2211) | 196178..197179 | + | 1002 | WP_104891277 | P-type DNA transfer ATPase VirB11 | virB11 |
| RLV_RS38440 | 197440..197640 | - | 201 | WP_131618399 | hypothetical protein | - |
| RLV_RS37995 (RLV_2212) | 197760..198482 | + | 723 | WP_104891278 | response regulator | - |
| RLV_RS39465 | 198565..198654 | + | 90 | Protein_203 | IS6 family transposase | - |
| RLV_RS38000 (RLV_2214) | 198716..199021 | - | 306 | Protein_204 | DDE-type integrase/transposase/recombinase | - |
| RLV_RS38005 (RLV_2215) | 199127..200293 | + | 1167 | WP_281060848 | IS256 family transposase | - |
| RLV_RS38010 (RLV_2216) | 200329..201012 | + | 684 | Protein_206 | IS5 family transposase | - |