T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 82607..91785
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RLV_RS37495 (RLV_2107) | 77875..80563 | - | 2689 | Protein_91 | shikimate kinase | - |
| RLV_RS37500 (RLV_2108) | 80569..81319 | + | 751 | Protein_92 | IS6 family transposase | - |
| RLV_RS39420 (RLV_2109) | 81651..82484 | + | 834 | WP_245461638 | lytic transglycosylase domain-containing protein | - |
| RLV_RS37510 (RLV_2110) | 82607..82918 | + | 312 | WP_077988068 | TrbC/VirB2 family protein | virB2 |
| RLV_RS37515 | 83002..83280 | + | 279 | WP_104891276 | VirB3 family type IV secretion system protein | virB3 |
| RLV_RS39425 (RLV_2111) | 83339..84064 | + | 726 | WP_245461639 | hypothetical protein | virb4 |
| RLV_RS37520 (RLV_2112) | 84007..85632 | + | 1626 | WP_245461641 | DUF87 domain-containing protein | virb4 |
| RLV_RS37525 | 85763..86566 | + | 804 | WP_245315068 | type IV secretion system protein | - |
| RLV_RS39430 (RLV_2114) | 86607..87113 | + | 507 | WP_245461640 | hypothetical protein | virB6 |
| RLV_RS39435 | 87077..87715 | + | 639 | WP_245461642 | type IV secretion system protein | virB6 |
| RLV_RS37535 (RLV_2115) | 87928..88602 | + | 675 | WP_077988072 | type IV secretion system protein | virB8 |
| RLV_RS37540 (RLV_2116) | 88630..89412 | + | 783 | WP_077988073 | TrbG/VirB9 family P-type conjugative transfer protein | virB9 |
| RLV_RS37545 (RLV_2117) | 89612..90787 | + | 1176 | WP_104891313 | TrbI/VirB10 family protein | virB10 |
| RLV_RS37550 (RLV_2118) | 90784..91785 | + | 1002 | WP_104891277 | P-type DNA transfer ATPase VirB11 | virB11 |
| RLV_RS38420 | 92046..92246 | - | 201 | WP_131618399 | hypothetical protein | - |
| RLV_RS37555 (RLV_2119) | 92366..93088 | + | 723 | WP_104891278 | response regulator | - |
| RLV_RS37560 (RLV_2120) | 93247..93999 | + | 753 | WP_104891314 | IS6-like element ISRle39A family transposase | - |