T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 472578..484447
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NXC24_RS23970 (NXC24_PB00502) | 469572..470138 | + | 567 | WP_104825901 | conjugative transfer signal peptidase TraF | - |
| NXC24_RS23975 (NXC24_PB00503) | 470128..471291 | + | 1164 | WP_104825902 | conjugal transfer protein TraB | - |
| NXC24_RS35900 | 471955..472309 | + | 355 | Protein_429 | transposase | - |
| NXC24_RS23985 (NXC24_PB00506) | 472578..473186 | + | 609 | WP_104825903 | TraH family protein | virB1 |
| NXC24_RS23990 (NXC24_PB00507) | 473448..473684 | - | 237 | WP_104825904 | helix-turn-helix transcriptional regulator | - |
| NXC24_RS23995 (NXC24_PB00508) | 473934..474248 | + | 315 | WP_104825905 | transcriptional repressor TraM | - |
| NXC24_RS24000 (NXC24_PB00509) | 474252..474956 | - | 705 | WP_104825906 | autoinducer binding domain-containing protein | - |
| NXC24_RS24005 (NXC24_PB00510) | 475115..476416 | - | 1302 | WP_104825907 | IncP-type conjugal transfer protein TrbI | virB10 |
| NXC24_RS24010 (NXC24_PB00511) | 476427..476861 | - | 435 | WP_104825908 | conjugal transfer protein TrbH | - |
| NXC24_RS24015 (NXC24_PB00512) | 476865..477677 | - | 813 | WP_104825909 | P-type conjugative transfer protein TrbG | virB9 |
| NXC24_RS24020 (NXC24_PB00513) | 477694..478356 | - | 663 | WP_104825910 | conjugal transfer protein TrbF | virB8 |
| NXC24_RS24025 (NXC24_PB00514) | 478381..479559 | - | 1179 | WP_104825911 | P-type conjugative transfer protein TrbL | virB6 |
| NXC24_RS24030 (NXC24_PB00515) | 479564..480367 | - | 804 | WP_104825912 | P-type conjugative transfer protein TrbJ | virB5 |
| NXC24_RS24035 (NXC24_PB00516) | 480339..482795 | - | 2457 | WP_104825913 | conjugal transfer protein TrbE | virb4 |
| NXC24_RS24040 (NXC24_PB00517) | 482805..483104 | - | 300 | WP_104825914 | conjugal transfer protein TrbD | virB3 |
| NXC24_RS24045 (NXC24_PB00518) | 483097..483480 | - | 384 | WP_104825915 | TrbC/VirB2 family protein | virB2 |
| NXC24_RS24050 (NXC24_PB00519) | 483470..484447 | - | 978 | WP_104825916 | P-type conjugative transfer ATPase TrbB | virB11 |
| NXC24_RS24055 (NXC24_PB00520) | 484444..485082 | - | 639 | WP_104825917 | acyl-homoserine-lactone synthase TraI | - |
| NXC24_RS24060 (NXC24_PB00521) | 485459..486679 | + | 1221 | WP_104825918 | plasmid partitioning protein RepA | - |
| NXC24_RS24065 (NXC24_PB00522) | 486739..487710 | + | 972 | WP_104825919 | plasmid partitioning protein RepB | - |
| NXC24_RS24070 (NXC24_PB00523) | 487872..489086 | + | 1215 | WP_104825920 | plasmid replication protein RepC | - |