T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 28971..57114
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SH282_RS00170 (SH282_00033) | 24943..25377 | + | 435 | WP_000845953 | conjugation system SOS inhibitor PsiB | - |
| SH282_RS00175 (SH282_00034) | 25374..26093 | + | 720 | WP_001276217 | plasmid SOS inhibition protein A | - |
| SH282_RS00180 (SH282_00035) | 26315..26464 | + | 150 | Protein_36 | plasmid maintenance protein Mok | - |
| SH282_RS00185 | 26406..26531 | + | 126 | WP_001372321 | type I toxin-antitoxin system Hok family toxin | - |
| SH282_RS00190 | 26850..27146 | - | 297 | Protein_38 | hypothetical protein | - |
| SH282_RS00195 (SH282_00036) | 27446..27742 | + | 297 | WP_001272251 | hypothetical protein | - |
| SH282_RS00200 (SH282_00037) | 27853..28674 | + | 822 | WP_001234445 | DUF932 domain-containing protein | - |
| SH282_RS00205 (SH282_00038) | 28971..29573 | - | 603 | WP_000243713 | transglycosylase SLT domain-containing protein | virB1 |
| SH282_RS00210 (SH282_00039) | 29896..30279 | + | 384 | WP_001354030 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| SH282_RS00215 (SH282_00040) | 30473..31144 | + | 672 | WP_000283561 | conjugal transfer transcriptional regulator TraJ | - |
| SH282_RS00220 | 31281..31508 | + | 228 | WP_000089263 | conjugal transfer relaxosome protein TraY | - |
| SH282_RS00225 (SH282_00041) | 31541..31900 | + | 360 | WP_001098992 | type IV conjugative transfer system pilin TraA | - |
| SH282_RS00230 (SH282_00042) | 31915..32226 | + | 312 | WP_000012113 | type IV conjugative transfer system protein TraL | traL |
| SH282_RS00235 (SH282_00043) | 32248..32814 | + | 567 | WP_000399780 | type IV conjugative transfer system protein TraE | traE |
| SH282_RS00240 (SH282_00044) | 32801..33529 | + | 729 | WP_001230772 | type-F conjugative transfer system secretin TraK | traK |
| SH282_RS00245 (SH282_00045) | 33529..34980 | + | 1452 | WP_000146675 | F-type conjugal transfer pilus assembly protein TraB | traB |
| SH282_RS00250 (SH282_00046) | 34970..35536 | + | 567 | WP_000896599 | conjugal transfer pilus-stabilizing protein TraP | - |
| SH282_RS00255 (SH282_00047) | 35523..35843 | + | 321 | WP_001057307 | conjugal transfer protein TrbD | - |
| SH282_RS00260 (SH282_00048) | 35840..36355 | + | 516 | WP_000809881 | type IV conjugative transfer system lipoprotein TraV | traV |
| SH282_RS00265 | 36490..36711 | + | 222 | WP_001278683 | conjugal transfer protein TraR | - |
| SH282_RS00270 (SH282_00049) | 36704..37180 | + | 477 | WP_000549587 | hypothetical protein | - |
| SH282_RS00275 (SH282_00050) | 37260..37478 | + | 219 | WP_000556745 | hypothetical protein | - |
| SH282_RS00280 (SH282_00051) | 37506..37853 | + | 348 | WP_000836682 | hypothetical protein | - |
| SH282_RS00285 (SH282_00052) | 37979..40609 | + | 2631 | WP_000069777 | type IV secretion system protein TraC | virb4 |
| SH282_RS00290 (SH282_00053) | 40606..40992 | + | 387 | WP_000214084 | type-F conjugative transfer system protein TrbI | - |
| SH282_RS00295 (SH282_00054) | 40989..41621 | + | 633 | WP_001203728 | type-F conjugative transfer system protein TraW | traW |
| SH282_RS00300 (SH282_00055) | 41618..42610 | + | 993 | WP_000830838 | conjugal transfer pilus assembly protein TraU | traU |
| SH282_RS00305 (SH282_00056) | 42640..42945 | + | 306 | WP_000224416 | hypothetical protein | - |
| SH282_RS00310 (SH282_00057) | 42954..43592 | + | 639 | WP_001080256 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| SH282_RS00315 (SH282_00058) | 43589..45439 | + | 1851 | WP_000821856 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| SH282_RS00320 (SH282_00059) | 45466..45723 | + | 258 | WP_000864353 | conjugal transfer protein TrbE | - |
| SH282_RS00325 (SH282_00060) | 45716..46459 | + | 744 | WP_001030371 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| SH282_RS00330 (SH282_00061) | 46473..46817 | + | 345 | WP_000556796 | conjugal transfer protein TrbA | - |
| SH282_RS00335 (SH282_00062) | 46936..47220 | + | 285 | WP_000624194 | type-F conjugative transfer system pilin chaperone TraQ | - |
| SH282_RS00340 (SH282_00063) | 47207..47752 | + | 546 | WP_000059831 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| SH282_RS00345 | 47682..48029 | + | 348 | WP_001309242 | P-type conjugative transfer protein TrbJ | - |
| SH282_RS00350 (SH282_00064) | 48010..48402 | + | 393 | WP_000660699 | F-type conjugal transfer protein TrbF | - |
| SH282_RS00355 (SH282_00065) | 48389..49762 | + | 1374 | WP_000944331 | conjugal transfer pilus assembly protein TraH | traH |
| SH282_RS00360 (SH282_00066) | 49759..52581 | + | 2823 | WP_001007039 | conjugal transfer mating-pair stabilization protein TraG | traG |
| SH282_RS00365 (SH282_00067) | 52597..53082 | + | 486 | WP_000605870 | hypothetical protein | - |
| SH282_RS00370 (SH282_00068) | 53131..53862 | + | 732 | WP_000782451 | conjugal transfer complement resistance protein TraT | - |
| SH282_RS00375 (SH282_00069) | 54065..54802 | + | 738 | WP_000199905 | hypothetical protein | - |
| SH282_RS00380 (SH282_00070) | 54853..57114 | + | 2262 | WP_281041326 | type IV conjugative transfer system coupling protein TraD | virb4 |