T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 39137..67244
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SH242_RS00225 (SH242_00045) | 35109..35543 | + | 435 | WP_000845953 | conjugation system SOS inhibitor PsiB | - |
| SH242_RS00230 (SH242_00046) | 35540..36259 | + | 720 | WP_001276217 | plasmid SOS inhibition protein A | - |
| SH242_RS00235 (SH242_00047) | 36481..36630 | + | 150 | Protein_47 | plasmid maintenance protein Mok | - |
| SH242_RS00240 | 36572..36697 | + | 126 | WP_001372321 | type I toxin-antitoxin system Hok family toxin | - |
| SH242_RS00245 | 37016..37312 | - | 297 | Protein_49 | hypothetical protein | - |
| SH242_RS00250 (SH242_00048) | 37612..37908 | + | 297 | WP_001272251 | hypothetical protein | - |
| SH242_RS00255 (SH242_00049) | 38019..38840 | + | 822 | WP_001234445 | DUF932 domain-containing protein | - |
| SH242_RS00260 (SH242_00050) | 39137..39739 | - | 603 | WP_000243713 | transglycosylase SLT domain-containing protein | virB1 |
| SH242_RS00265 (SH242_00051) | 40062..40445 | + | 384 | WP_001354030 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| SH242_RS00270 (SH242_00052) | 40639..41310 | + | 672 | WP_000283561 | conjugal transfer transcriptional regulator TraJ | - |
| SH242_RS00275 | 41447..41674 | + | 228 | WP_000089263 | conjugal transfer relaxosome protein TraY | - |
| SH242_RS00280 (SH242_00053) | 41707..42066 | + | 360 | WP_001098992 | type IV conjugative transfer system pilin TraA | - |
| SH242_RS00285 (SH242_00054) | 42081..42392 | + | 312 | WP_000012113 | type IV conjugative transfer system protein TraL | traL |
| SH242_RS00290 (SH242_00055) | 42414..42980 | + | 567 | WP_000399780 | type IV conjugative transfer system protein TraE | traE |
| SH242_RS00295 (SH242_00056) | 42967..43695 | + | 729 | WP_001230772 | type-F conjugative transfer system secretin TraK | traK |
| SH242_RS00300 (SH242_00057) | 43695..45146 | + | 1452 | WP_000146675 | F-type conjugal transfer pilus assembly protein TraB | traB |
| SH242_RS00305 (SH242_00058) | 45136..45702 | + | 567 | WP_000896599 | conjugal transfer pilus-stabilizing protein TraP | - |
| SH242_RS00310 (SH242_00059) | 45689..46009 | + | 321 | WP_001057307 | conjugal transfer protein TrbD | - |
| SH242_RS00315 (SH242_00060) | 46006..46521 | + | 516 | WP_000809881 | type IV conjugative transfer system lipoprotein TraV | traV |
| SH242_RS00320 | 46656..46877 | + | 222 | WP_001278683 | conjugal transfer protein TraR | - |
| SH242_RS00325 (SH242_00061) | 46870..47346 | + | 477 | WP_000549587 | hypothetical protein | - |
| SH242_RS00330 (SH242_00062) | 47426..47644 | + | 219 | WP_000556745 | hypothetical protein | - |
| SH242_RS00335 (SH242_00063) | 47672..48019 | + | 348 | WP_000836682 | hypothetical protein | - |
| SH242_RS00340 (SH242_00064) | 48145..50775 | + | 2631 | WP_000069777 | type IV secretion system protein TraC | virb4 |
| SH242_RS00345 (SH242_00065) | 50772..51158 | + | 387 | WP_000214084 | type-F conjugative transfer system protein TrbI | - |
| SH242_RS00350 (SH242_00066) | 51155..51787 | + | 633 | WP_001203728 | type-F conjugative transfer system protein TraW | traW |
| SH242_RS00355 (SH242_00067) | 51784..52776 | + | 993 | WP_000830838 | conjugal transfer pilus assembly protein TraU | traU |
| SH242_RS00360 (SH242_00068) | 52806..53111 | + | 306 | WP_000224416 | hypothetical protein | - |
| SH242_RS00365 (SH242_00069) | 53120..53758 | + | 639 | WP_001080256 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| SH242_RS00370 (SH242_00070) | 53755..55605 | + | 1851 | WP_000821856 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| SH242_RS00375 (SH242_00071) | 55632..55889 | + | 258 | WP_000864353 | conjugal transfer protein TrbE | - |
| SH242_RS00380 (SH242_00072) | 55882..56625 | + | 744 | WP_001030371 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| SH242_RS00385 (SH242_00073) | 56639..56983 | + | 345 | WP_000556796 | conjugal transfer protein TrbA | - |
| SH242_RS00390 (SH242_00074) | 57102..57386 | + | 285 | WP_000624194 | type-F conjugative transfer system pilin chaperone TraQ | - |
| SH242_RS00395 (SH242_00075) | 57373..57918 | + | 546 | WP_000059831 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| SH242_RS00400 | 57848..58195 | + | 348 | WP_001309242 | P-type conjugative transfer protein TrbJ | - |
| SH242_RS00405 (SH242_00076) | 58176..58568 | + | 393 | WP_000660699 | F-type conjugal transfer protein TrbF | - |
| SH242_RS00410 (SH242_00077) | 58555..59928 | + | 1374 | WP_000944331 | conjugal transfer pilus assembly protein TraH | traH |
| SH242_RS00415 (SH242_00078) | 59925..62747 | + | 2823 | WP_001007039 | conjugal transfer mating-pair stabilization protein TraG | traG |
| SH242_RS00420 (SH242_00079) | 62763..63248 | + | 486 | WP_000605870 | hypothetical protein | - |
| SH242_RS00425 (SH242_00080) | 63297..64028 | + | 732 | WP_000782451 | conjugal transfer complement resistance protein TraT | - |
| SH242_RS00430 (SH242_00081) | 64231..64968 | + | 738 | WP_000199905 | hypothetical protein | - |
| SH242_RS00435 (SH242_00082) | 65019..67244 | + | 2226 | WP_096002736 | type IV conjugative transfer system coupling protein TraD | virb4 |