T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 1267..29467
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RG61_RS27440 (RG61_26000) | 1267..3465 | - | 2199 | WP_073519998 | type IV conjugative transfer system coupling protein TraD | virb4 |
| RG61_RS27445 (RG61_26005) | 3718..4449 | - | 732 | WP_000850424 | conjugal transfer complement resistance protein TraT | - |
| RG61_RS27450 (RG61_26010) | 4463..4972 | - | 510 | WP_000628099 | conjugal transfer entry exclusion protein TraS | - |
| RG61_RS27455 (RG61_26015) | 4969..7794 | - | 2826 | WP_001007030 | conjugal transfer mating-pair stabilization protein TraG | traG |
| RG61_RS27460 (RG61_26020) | 7791..9164 | - | 1374 | WP_001137358 | conjugal transfer pilus assembly protein TraH | traH |
| RG61_RS27465 (RG61_26025) | 9164..9526 | - | 363 | WP_073519999 | P-type conjugative transfer protein TrbJ | - |
| RG61_RS27470 (RG61_26030) | 9456..10001 | - | 546 | WP_000060037 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| RG61_RS27475 (RG61_26035) | 9988..10272 | - | 285 | WP_000624108 | type-F conjugative transfer system pilin chaperone TraQ | - |
| RG61_RS27480 (RG61_26040) | 10391..10738 | - | 348 | WP_072656932 | conjugal transfer protein TrbA | - |
| RG61_RS27485 (RG61_26045) | 10754..11497 | - | 744 | WP_073520000 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| RG61_RS27490 (RG61_26050) | 11490..11737 | - | 248 | Protein_11 | conjugal transfer protein TrbE | - |
| RG61_RS27495 (RG61_26055) | 11773..13623 | - | 1851 | WP_073520001 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| RG61_RS27500 (RG61_26060) | 13620..14042 | - | 423 | WP_073520002 | HNH endonuclease signature motif containing protein | - |
| RG61_RS27505 (RG61_26065) | 14067..14438 | - | 372 | WP_073520003 | hypothetical protein | - |
| RG61_RS27510 (RG61_26070) | 14435..15073 | - | 639 | WP_073520004 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| RG61_RS27515 (RG61_26075) | 15100..15618 | - | 519 | WP_073520005 | hypothetical protein | - |
| RG61_RS27525 (RG61_26085) | 16021..17013 | - | 993 | WP_073520007 | conjugal transfer pilus assembly protein TraU | traU |
| RG61_RS27530 (RG61_26090) | 17010..17642 | - | 633 | WP_073520008 | type-F conjugative transfer system protein TraW | traW |
| RG61_RS27535 (RG61_26095) | 17639..18025 | - | 387 | WP_073520009 | type-F conjugative transfer system protein TrbI | - |
| RG61_RS27540 (RG61_26100) | 18022..20649 | - | 2628 | WP_073520010 | type IV secretion system protein TraC | virb4 |
| RG61_RS27545 (RG61_26105) | 20676..21053 | - | 378 | WP_073520011 | hypothetical protein | - |
| RG61_RS27550 (RG61_26110) | 21050..21523 | - | 474 | WP_073520012 | hypothetical protein | - |
| RG61_RS27555 (RG61_26115) | 21516..21737 | - | 222 | WP_001278695 | conjugal transfer protein TraR | - |
| RG61_RS27560 (RG61_26120) | 21872..22387 | - | 516 | WP_073520013 | type IV conjugative transfer system lipoprotein TraV | traV |
| RG61_RS27565 (RG61_26125) | 22384..22635 | - | 252 | WP_073520014 | conjugal transfer protein TrbG | - |
| RG61_RS27570 (RG61_26130) | 22628..22948 | - | 321 | WP_073520015 | conjugal transfer protein TrbD | virb4 |
| RG61_RS27575 (RG61_26135) | 22945..23517 | - | 573 | WP_024179131 | conjugal transfer pilus-stabilizing protein TraP | - |
| RG61_RS27580 (RG61_26140) | 23507..24934 | - | 1428 | WP_000146685 | F-type conjugal transfer pilus assembly protein TraB | traB |
| RG61_RS27585 (RG61_26145) | 24934..25662 | - | 729 | WP_001230787 | type-F conjugative transfer system secretin TraK | traK |
| RG61_RS27590 (RG61_26150) | 25649..26215 | - | 567 | WP_000399792 | type IV conjugative transfer system protein TraE | traE |
| RG61_RS27595 (RG61_26155) | 26237..26548 | - | 312 | WP_000012106 | type IV conjugative transfer system protein TraL | traL |
| RG61_RS27600 (RG61_26160) | 26563..26928 | - | 366 | WP_073520016 | type IV conjugative transfer system pilin TraA | - |
| RG61_RS27605 (RG61_26165) | 26962..27189 | - | 228 | WP_001254386 | conjugal transfer relaxosome protein TraY | - |
| RG61_RS27610 (RG61_26170) | 27283..27969 | - | 687 | WP_073520017 | PAS domain-containing protein | - |
| RG61_RS27615 (RG61_26175) | 28160..28543 | - | 384 | WP_000124981 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| RG61_RS27625 (RG61_26180) | 28820..29467 | + | 648 | WP_000614935 | transglycosylase SLT domain-containing protein | virB1 |
| RG61_RS27630 (RG61_26185) | 29764..30585 | - | 822 | WP_073520018 | DUF932 domain-containing protein | - |
| RG61_RS27635 (RG61_26190) | 30703..30990 | - | 288 | WP_000107535 | hypothetical protein | - |
| RG61_RS27640 (RG61_26195) | 31014..31220 | - | 207 | WP_073520019 | single-stranded DNA-binding protein | - |
| RG61_RS29825 | 31290..31463 | + | 174 | Protein_40 | hypothetical protein | - |
| RG61_RS30060 | 31461..31690 | - | 230 | Protein_41 | hypothetical protein | - |
| RG61_RS27655 (RG61_26205) | 31910..32035 | - | 126 | WP_001372321 | type I toxin-antitoxin system Hok family toxin | - |
| RG61_RS29830 | 31977..32126 | - | 150 | Protein_43 | plasmid maintenance protein Mok | - |
| RG61_RS29835 (RG61_26210) | 32148..32336 | + | 189 | WP_001299721 | hypothetical protein | - |
| RG61_RS27665 (RG61_26215) | 32305..33067 | - | 763 | Protein_45 | plasmid SOS inhibition protein A | - |
| RG61_RS27670 (RG61_26220) | 33064..33498 | - | 435 | WP_000845949 | conjugation system SOS inhibitor PsiB | - |