T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 49965..78466
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HXF40_RS00275 (D742_p2003) | 45281..45868 | + | 588 | Protein_54 | hypothetical protein | - |
| HXF40_RS00280 (D742_p2091) | 45937..46371 | + | 435 | WP_000845953 | conjugation system SOS inhibitor PsiB | - |
| HXF40_RS00285 (D742_p2092) | 46368..47087 | + | 720 | WP_001276217 | plasmid SOS inhibition protein A | - |
| HXF40_RS00580 | 47309..47458 | + | 150 | Protein_57 | plasmid maintenance protein Mok | - |
| HXF40_RS00290 (D742_p2111) | 47400..47525 | + | 126 | WP_001372321 | type I toxin-antitoxin system Hok family toxin | - |
| HXF40_RS00295 (D742_p2002) | 47844..48140 | - | 297 | Protein_59 | hypothetical protein | - |
| HXF40_RS00300 (D742_p2001) | 48440..48736 | + | 297 | WP_001272251 | hypothetical protein | - |
| HXF40_RS00305 (D742_p2116) | 48847..49668 | + | 822 | WP_001234445 | DUF932 domain-containing protein | - |
| HXF40_RS00310 (D742_p2045) | 49965..50567 | - | 603 | WP_000243713 | transglycosylase SLT domain-containing protein | virB1 |
| HXF40_RS00315 (D742_p2066) | 50890..51273 | + | 384 | WP_001354030 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| HXF40_RS00320 (D742_p2069) | 51467..52138 | + | 672 | WP_000283561 | conjugal transfer transcriptional regulator TraJ | - |
| HXF40_RS00325 (D742_p2055) | 52275..52502 | + | 228 | WP_000089263 | conjugal transfer relaxosome protein TraY | - |
| HXF40_RS00330 (D742_p2078) | 52535..52894 | + | 360 | WP_001098992 | type IV conjugative transfer system pilin TraA | - |
| HXF40_RS00335 (D742_p2067) | 52909..53220 | + | 312 | WP_000012113 | type IV conjugative transfer system protein TraL | traL |
| HXF40_RS00340 (D742_p2074) | 53242..53808 | + | 567 | WP_000399780 | type IV conjugative transfer system protein TraE | traE |
| HXF40_RS00345 (D742_p2068) | 53795..54523 | + | 729 | WP_001230772 | type-F conjugative transfer system secretin TraK | traK |
| HXF40_RS00350 (D742_p2077) | 54523..55974 | + | 1452 | WP_000146675 | F-type conjugal transfer pilus assembly protein TraB | traB |
| HXF40_RS00355 (D742_p2064) | 55964..56530 | + | 567 | WP_000896599 | conjugal transfer pilus-stabilizing protein TraP | - |
| HXF40_RS00360 (D742_p2050) | 56517..56837 | + | 321 | WP_001057307 | conjugal transfer protein TrbD | - |
| HXF40_RS00365 (D742_p2058) | 56834..57349 | + | 516 | WP_000809881 | type IV conjugative transfer system lipoprotein TraV | traV |
| HXF40_RS00370 (D742_p2062) | 57484..57705 | + | 222 | WP_001278683 | conjugal transfer protein TraR | - |
| HXF40_RS00375 (D742_p2014) | 57698..58111 | + | 414 | WP_000549589 | hypothetical protein | - |
| HXF40_RS00380 (D742_p2013) | 58104..58577 | + | 474 | WP_000549568 | hypothetical protein | - |
| HXF40_RS00385 (D742_p2012) | 58657..58875 | + | 219 | WP_000556745 | hypothetical protein | - |
| HXF40_RS00390 (D742_p2011) | 58903..59250 | + | 348 | WP_000836682 | hypothetical protein | - |
| HXF40_RS00395 (D742_p2076) | 59376..62006 | + | 2631 | WP_000069777 | type IV secretion system protein TraC | virb4 |
| HXF40_RS00400 (D742_p2047) | 62003..62389 | + | 387 | WP_000214084 | type-F conjugative transfer system protein TrbI | - |
| HXF40_RS00405 (D742_p2057) | 62386..63018 | + | 633 | WP_001203728 | type-F conjugative transfer system protein TraW | traW |
| HXF40_RS00410 (D742_p2059) | 63015..64007 | + | 993 | WP_000830838 | conjugal transfer pilus assembly protein TraU | traU |
| HXF40_RS00415 (D742_p2010) | 64037..64342 | + | 306 | WP_000224416 | hypothetical protein | - |
| HXF40_RS00420 (D742_p2051) | 64351..64989 | + | 639 | WP_001080256 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| HXF40_RS00425 | 64986..66836 | + | 1851 | Protein_85 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| HXF40_RS00430 (D742_p2049) | 66863..67120 | + | 258 | WP_000864353 | conjugal transfer protein TrbE | - |
| HXF40_RS00435 (D742_p2073) | 67113..67856 | + | 744 | WP_001030371 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| HXF40_RS00440 (D742_p2053) | 67870..68214 | + | 345 | WP_000556796 | conjugal transfer protein TrbA | - |
| HXF40_RS00445 (D742_p2063) | 68333..68617 | + | 285 | WP_000624194 | type-F conjugative transfer system pilin chaperone TraQ | - |
| HXF40_RS00450 (D742_p2052) | 68604..69149 | + | 546 | WP_000059831 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| HXF40_RS00455 (D742_p2046) | 69079..69426 | + | 348 | WP_001309242 | P-type conjugative transfer protein TrbJ | - |
| HXF40_RS00460 (D742_p2048) | 69407..69799 | + | 393 | WP_000660699 | F-type conjugal transfer protein TrbF | - |
| HXF40_RS00465 (D742_p2071) | 69786..71159 | + | 1374 | WP_000944331 | conjugal transfer pilus assembly protein TraH | traH |
| HXF40_RS00470 (D742_p2072) | 71156..73978 | + | 2823 | WP_001007039 | conjugal transfer mating-pair stabilization protein TraG | traG |
| HXF40_RS00475 (D742_p2061) | 73994..74479 | + | 486 | WP_000605870 | hypothetical protein | - |
| HXF40_RS00480 (D742_p2060) | 74528..75259 | + | 732 | WP_000782451 | conjugal transfer complement resistance protein TraT | - |
| HXF40_RS00485 (D742_p2009) | 75462..76199 | + | 738 | WP_000199905 | hypothetical protein | - |
| HXF40_RS00490 (D742_p2075) | 76250..78466 | + | 2217 | WP_000009331 | type IV conjugative transfer system coupling protein TraD | virb4 |