T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 33919..59581
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HS862_RS00220 (pSPUV_047) | 33919..36252 | - | 2334 | WP_015059447 | type IV conjugative transfer system coupling protein TraD | prgC |
| HS862_RS00225 (pSPUV_048) | 36629..37360 | - | 732 | WP_000850404 | conjugal transfer complement resistance protein TraT | - |
| HS862_RS00230 (pSPUV_049) | 37606..38088 | - | 483 | WP_000787664 | hypothetical protein | - |
| HS862_RS00550 | 39325..40596 | - | 1272 | Protein_48 | conjugal transfer pilus assembly protein TraH | - |
| HS862_RS00240 (pSPUV_051) | 40586..41134 | - | 549 | WP_000055842 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| HS862_RS00245 (pSPUV_052) | 41121..41414 | - | 294 | WP_001233883 | type-F conjugative transfer system pilin chaperone TraQ | - |
| HS862_RS00250 (pSPUV_053) | 41628..42371 | - | 744 | WP_001746545 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| HS862_RS00255 | 42384..42599 | - | 216 | WP_001746544 | conjugal transfer protein TrbE | - |
| HS862_RS00260 | 42610..43086 | - | 477 | WP_001746543 | hypothetical protein | - |
| HS862_RS00265 (pSPUV_055) | 43097..44923 | - | 1827 | WP_001746541 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| HS862_RS00270 (pSPUV_056) | 44920..45339 | - | 420 | WP_001229398 | HNH endonuclease | - |
| HS862_RS00275 (pSPUV_057) | 45376..46014 | - | 639 | WP_001576661 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| HS862_RS00280 (pSPUV_058) | 45999..46307 | - | 309 | WP_001576663 | hypothetical protein | - |
| HS862_RS00285 (pSPUV_059) | 46326..47318 | - | 993 | WP_015059450 | conjugal transfer pilus assembly protein TraU | traU |
| HS862_RS00290 (pSPUV_060) | 47315..47947 | - | 633 | WP_015059451 | type-F conjugative transfer system protein TraW | traW |
| HS862_RS00295 (pSPUV_061) | 47944..48330 | - | 387 | WP_000102756 | type-F conjugative transfer system protein TrbI | - |
| HS862_RS00300 (pSPUV_062) | 48305..50952 | - | 2648 | Protein_61 | type IV secretion system protein TraC | - |
| HS862_RS00305 (pSPUV_063) | 50968..51351 | - | 384 | WP_000870325 | hypothetical protein | - |
| HS862_RS00310 (pSPUV_064) | 51348..51815 | - | 468 | WP_000549559 | hypothetical protein | - |
| HS862_RS00315 (pSPUV_065) | 51808..52029 | - | 222 | WP_001278699 | conjugal transfer protein TraR | - |
| HS862_RS00320 (pSPUV_066) | 52164..52679 | - | 516 | WP_001746951 | type IV conjugative transfer system lipoprotein TraV | traV |
| HS862_RS00325 (pSPUV_067) | 52676..52900 | - | 225 | WP_001746950 | DUF2689 domain-containing protein | - |
| HS862_RS00330 (pSPUV_068) | 52878..53474 | - | 597 | WP_000527898 | conjugal transfer pilus-stabilizing protein TraP | - |
| HS862_RS00335 (pSPUV_069) | 53464..54885 | - | 1422 | WP_000146698 | F-type conjugal transfer pilus assembly protein TraB | traB |
| HS862_RS00340 (pSPUV_070) | 54885..55625 | - | 741 | WP_015059453 | type-F conjugative transfer system secretin TraK | traK |
| HS862_RS00345 (pSPUV_071) | 55612..56178 | - | 567 | WP_000399760 | type IV conjugative transfer system protein TraE | traE |
| HS862_RS00350 (pSPUV_072) | 56200..56511 | - | 312 | WP_000012129 | type IV conjugative transfer system protein TraL | traL |
| HS862_RS00355 (pSPUV_073) | 56526..56888 | - | 363 | WP_001274202 | type IV conjugative transfer system pilin TraA | - |
| HS862_RS00360 (pSPUV_074) | 56930..57325 | - | 396 | WP_001746564 | conjugal transfer relaxosome DNA-bindin protein TraY | - |
| HS862_RS00365 (pSPUV_075) | 57424..58113 | - | 690 | WP_001746563 | conjugal transfer transcriptional regulator TraJ | - |
| HS862_RS00370 (pSPUV_076) | 58308..58688 | - | 381 | WP_001151568 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| HS862_RS00375 (pSPUV_077) | 59111..59581 | + | 471 | WP_024134052 | transglycosylase SLT domain-containing protein | virB1 |
| HS862_RS00380 (pSPUV_079) | 59892..60710 | - | 819 | Protein_77 | DUF932 domain-containing protein | - |
| HS862_RS00385 (pSPUV_080) | 60813..60983 | - | 171 | WP_000229547 | hypothetical protein | - |
| HS862_RS00560 (pSPUV_081) | 61057..61185 | - | 129 | WP_001746558 | hypothetical protein | - |
| HS862_RS00390 (pSPUV_082) | 61220..61876 | - | 657 | Protein_80 | plasmid SOS inhibition protein A | - |
| HS862_RS00395 (pSPUV_083) | 61870..62004 | - | 135 | Protein_81 | conjugation system SOS inhibitor PsiB family protein | - |
| HS862_RS00400 (pSPUV_084) | 62044..64027 | - | 1984 | Protein_82 | ParB/RepB/Spo0J family partition protein | - |
| HS862_RS00405 (pSPUV_085) | 64096..64236 | - | 141 | Protein_83 | DUF905 family protein | - |
| HS862_RS00410 (pSPUV_086) | 64238..64552 | - | 315 | Protein_84 | single-stranded DNA-binding protein SSB2 | - |