T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 21186..47123
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RG56_RS29820 | 16209..16464 | - | 256 | Protein_28 | hypothetical protein | - |
| RG56_RS26985 (RG56_25675) | 16659..17003 | + | 345 | WP_073519969 | hypothetical protein | - |
| RG56_RS26990 (RG56_25680) | 17147..17968 | + | 822 | WP_073519968 | DUF932 domain-containing protein | - |
| RG56_RS26995 (RG56_25685) | 18264..18833 | - | 570 | WP_077897971 | transglycosylase SLT domain-containing protein | - |
| RG56_RS27000 (RG56_25690) | 19197..19583 | + | 387 | WP_073519967 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| RG56_RS29825 (RG56_25695) | 19772..20463 | + | 692 | Protein_33 | PAS domain-containing protein | - |
| RG56_RS27010 (RG56_25700) | 20551..20778 | + | 228 | WP_073519965 | conjugal transfer relaxosome protein TraY | - |
| RG56_RS27015 (RG56_25705) | 20812..21171 | + | 360 | WP_073519964 | type IV conjugative transfer system pilin TraA | - |
| RG56_RS27020 (RG56_25710) | 21186..21497 | + | 312 | WP_073519963 | type IV conjugative transfer system protein TraL | traL |
| RG56_RS27025 (RG56_25715) | 21519..22085 | + | 567 | WP_073519962 | type IV conjugative transfer system protein TraE | traE |
| RG56_RS27030 (RG56_25720) | 22072..22803 | + | 732 | WP_073519961 | type-F conjugative transfer system secretin TraK | traK |
| RG56_RS27035 (RG56_25725) | 22803..24251 | + | 1449 | WP_073519960 | F-type conjugal transfer pilus assembly protein TraB | traB |
| RG56_RS27040 (RG56_25730) | 24241..24804 | + | 564 | WP_244584349 | conjugal transfer pilus-stabilizing protein TraP | - |
| RG56_RS27045 (RG56_25735) | 24791..25111 | + | 321 | WP_249531000 | conjugal transfer protein TrbD | - |
| RG56_RS27050 (RG56_25740) | 25108..25623 | + | 516 | WP_073519958 | type IV conjugative transfer system lipoprotein TraV | traV |
| RG56_RS27055 (RG56_25745) | 25758..25979 | + | 222 | WP_073519957 | conjugal transfer protein TraR | - |
| RG56_RS27060 (RG56_25750) | 25972..26448 | + | 477 | WP_073519956 | hypothetical protein | - |
| RG56_RS27065 (RG56_25755) | 26445..26915 | + | 471 | WP_073519955 | hypothetical protein | - |
| RG56_RS27070 (RG56_25760) | 26912..27307 | + | 396 | WP_073519954 | hypothetical protein | - |
| RG56_RS27075 (RG56_25765) | 27325..29952 | + | 2628 | WP_073519953 | type IV secretion system protein TraC | virb4 |
| RG56_RS27080 (RG56_25770) | 29949..30335 | + | 387 | WP_073519952 | type-F conjugative transfer system protein TrbI | - |
| RG56_RS27085 (RG56_25775) | 30332..30964 | + | 633 | WP_073519951 | type-F conjugative transfer system protein TraW | traW |
| RG56_RS27090 (RG56_25780) | 30961..31953 | + | 993 | WP_073519950 | conjugal transfer pilus assembly protein TraU | traU |
| RG56_RS27095 (RG56_25785) | 31962..32600 | + | 639 | WP_073519949 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| RG56_RS27100 (RG56_25790) | 32597..32977 | + | 381 | WP_073519948 | hypothetical protein | - |
| RG56_RS27105 (RG56_25795) | 33213..35096 | + | 1884 | WP_077897973 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| RG56_RS27110 (RG56_25800) | 35108..35575 | + | 468 | WP_073519947 | hypothetical protein | - |
| RG56_RS27115 (RG56_25805) | 35586..36329 | + | 744 | WP_073519946 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| RG56_RS27120 (RG56_25810) | 36343..36708 | + | 366 | WP_073519945 | hypothetical protein | - |
| RG56_RS27130 (RG56_25820) | 37094..37381 | + | 288 | WP_073519943 | type-F conjugative transfer system pilin chaperone TraQ | - |
| RG56_RS27135 (RG56_25825) | 37362..37916 | + | 555 | WP_073519942 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| RG56_RS27140 (RG56_25830) | 37929..38420 | + | 492 | WP_073519941 | hypothetical protein | - |
| RG56_RS27150 (RG56_25840) | 38918..40243 | + | 1326 | WP_244584350 | conjugal transfer pilus assembly protein TraH | traH |
| RG56_RS27155 (RG56_25845) | 40240..43092 | + | 2853 | WP_073519938 | conjugal transfer mating-pair stabilization protein TraG | traG |
| RG56_RS27160 (RG56_25850) | 43113..43610 | + | 498 | WP_073519937 | surface exclusion protein | - |
| RG56_RS27165 (RG56_25855) | 43642..44373 | + | 732 | WP_123006582 | conjugal transfer complement resistance protein TraT | - |
| RG56_RS27170 (RG56_25860) | 44970..47123 | + | 2154 | WP_073519936 | type IV conjugative transfer system coupling protein TraD | virb4 |