T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 49833..58923
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H5J00_RS00350 | 45864..46097 | - | 234 | WP_001191892 | hypothetical protein | - |
| H5J00_RS00355 | 46079..46696 | - | 618 | WP_001249396 | hypothetical protein | - |
| H5J00_RS00360 | 46864..49836 | + | 2973 | WP_064986968 | MobH family relaxase | - |
| H5J00_RS00365 | 49833..51698 | + | 1866 | WP_000178857 | conjugative transfer system coupling protein TraD | virb4 |
| H5J00_RS00370 | 51709..52293 | + | 585 | WP_000332868 | hypothetical protein | - |
| H5J00_RS00375 | 52250..52879 | + | 630 | WP_000743449 | DUF4400 domain-containing protein | tfc7 |
| H5J00_RS00380 | 52889..53335 | + | 447 | WP_000122507 | hypothetical protein | - |
| H5J00_RS00385 | 53345..53722 | + | 378 | WP_000869297 | hypothetical protein | - |
| H5J00_RS00390 | 53722..54384 | + | 663 | WP_001231464 | hypothetical protein | - |
| H5J00_RS00395 | 54565..54708 | + | 144 | WP_001275801 | hypothetical protein | - |
| H5J00_RS00400 | 54720..55085 | + | 366 | WP_001052530 | hypothetical protein | - |
| H5J00_RS00405 | 55230..55511 | + | 282 | WP_000805625 | type IV conjugative transfer system protein TraL | traL |
| H5J00_RS00410 | 55508..56134 | + | 627 | WP_001049717 | TraE/TraK family type IV conjugative transfer system protein | traE |
| H5J00_RS00415 | 56118..57035 | + | 918 | WP_000794249 | type-F conjugative transfer system secretin TraK | traK |
| H5J00_RS00420 | 57035..58348 | + | 1314 | WP_024131605 | TraB/VirB10 family protein | traB |
| H5J00_RS00425 | 58345..58923 | + | 579 | WP_000793435 | type IV conjugative transfer system lipoprotein TraV | traV |
| H5J00_RS00430 | 58927..59319 | + | 393 | WP_000479535 | TraA family conjugative transfer protein | - |
| H5J00_RS00435 | 59604..60866 | + | 1263 | WP_000608644 | IS1380-like element ISEcp1 family transposase | - |
| H5J00_RS00440 | 61190..62335 | + | 1146 | WP_000976514 | extended-spectrum class C beta-lactamase CMY-2 | - |
| H5J00_RS00445 | 62429..62962 | + | 534 | WP_001221666 | lipocalin family protein | - |
| H5J00_RS00450 | 62959..63276 | - | 318 | WP_000118520 | quaternary ammonium compound efflux SMR transporter SugE | - |
| H5J00_RS00455 | 63533..63898 | + | 366 | Protein_91 | LuxR family transcriptional regulator | - |