T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 3496..29551
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RG43_RS27015 (RG43_25485) | 2862..3089 | + | 228 | WP_000450532 | toxin-antitoxin system antitoxin VapB | - |
| RG43_RS27020 (RG43_25490) | 3089..3487 | + | 399 | WP_000911324 | type II toxin-antitoxin system VapC family toxin | - |
| RG43_RS27025 (RG43_25495) | 3496..5649 | - | 2154 | WP_000009350 | type IV conjugative transfer system coupling protein TraD | virb4 |
| RG43_RS29325 (RG43_25500) | 5902..6633 | - | 732 | WP_000850422 | conjugal transfer complement resistance protein TraT | - |
| RG43_RS29330 (RG43_25505) | 6658..7179 | - | 522 | WP_000632670 | conjugal transfer entry exclusion protein TraS | - |
| RG43_RS27035 (RG43_25510) | 7212..10028 | - | 2817 | WP_073507088 | conjugal transfer mating-pair stabilization protein TraG | traG |
| RG43_RS27040 (RG43_25515) | 10025..11398 | - | 1374 | WP_001137358 | conjugal transfer pilus assembly protein TraH | traH |
| RG43_RS27045 (RG43_25520) | 11398..11760 | - | 363 | WP_073507089 | P-type conjugative transfer protein TrbJ | - |
| RG43_RS27050 (RG43_25525) | 11690..12235 | - | 546 | WP_000059850 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| RG43_RS27055 (RG43_25530) | 12222..12506 | - | 285 | WP_000624109 | type-F conjugative transfer system pilin chaperone TraQ | - |
| RG43_RS27060 (RG43_25535) | 12587..12901 | + | 315 | WP_000415567 | hypothetical protein | - |
| RG43_RS27065 (RG43_25540) | 12903..13250 | - | 348 | WP_001287913 | conjugal transfer protein TrbA | - |
| RG43_RS27070 (RG43_25545) | 13266..14009 | - | 744 | WP_001030367 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| RG43_RS27075 (RG43_25550) | 14002..14259 | - | 258 | WP_000864318 | conjugal transfer protein TrbE | - |
| RG43_RS27080 (RG43_25555) | 14286..16094 | - | 1809 | WP_000821847 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| RG43_RS27085 (RG43_25560) | 16091..16729 | - | 639 | WP_000777688 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| RG43_RS27090 (RG43_25565) | 16738..17730 | - | 993 | WP_000830187 | conjugal transfer pilus assembly protein TraU | traU |
| RG43_RS27095 (RG43_25570) | 17727..18359 | - | 633 | WP_001203720 | type-F conjugative transfer system protein TraW | traW |
| RG43_RS27100 (RG43_25575) | 18356..18742 | - | 387 | WP_000097319 | type-F conjugative transfer system protein TrbI | - |
| RG43_RS27105 (RG43_25580) | 18739..21366 | - | 2628 | WP_001064247 | type IV secretion system protein TraC | virb4 |
| RG43_RS27110 (RG43_25585) | 21526..21747 | - | 222 | WP_001278689 | conjugal transfer protein TraR | - |
| RG43_RS27115 (RG43_25590) | 21882..22397 | - | 516 | WP_000809841 | type IV conjugative transfer system lipoprotein TraV | traV |
| RG43_RS27120 (RG43_25595) | 22394..22645 | - | 252 | WP_001038342 | conjugal transfer protein TrbG | - |
| RG43_RS27125 (RG43_25600) | 22657..22854 | - | 198 | WP_001324648 | conjugal transfer protein TrbD | - |
| RG43_RS27130 (RG43_25605) | 22841..23431 | - | 591 | WP_000002792 | conjugal transfer pilus-stabilizing protein TraP | - |
| RG43_RS27135 (RG43_25610) | 23421..24848 | - | 1428 | WP_000146692 | F-type conjugal transfer pilus assembly protein TraB | traB |
| RG43_RS27140 (RG43_25615) | 24848..25576 | - | 729 | WP_001230787 | type-F conjugative transfer system secretin TraK | traK |
| RG43_RS27145 (RG43_25620) | 25563..26129 | - | 567 | WP_000399792 | type IV conjugative transfer system protein TraE | traE |
| RG43_RS27150 (RG43_25625) | 26151..26462 | - | 312 | WP_000012106 | type IV conjugative transfer system protein TraL | traL |
| RG43_RS27155 (RG43_25630) | 26477..26842 | - | 366 | WP_000994779 | type IV conjugative transfer system pilin TraA | - |
| RG43_RS27160 (RG43_25635) | 26875..27270 | - | 396 | WP_001309237 | conjugal transfer relaxosome DNA-bindin protein TraY | - |
| RG43_RS27165 (RG43_25640) | 27369..28058 | - | 690 | WP_000283385 | conjugal transfer transcriptional regulator TraJ | - |
| RG43_RS27170 (RG43_25645) | 28245..28628 | - | 384 | WP_001151524 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| RG43_RS27175 (RG43_25650) | 28949..29551 | + | 603 | WP_000243709 | transglycosylase SLT domain-containing protein | virB1 |
| RG43_RS27180 (RG43_25655) | 29848..30669 | - | 822 | WP_001234469 | DUF932 domain-containing protein | - |
| RG43_RS27185 (RG43_25660) | 30791..31077 | - | 287 | Protein_36 | hypothetical protein | - |
| RG43_RS30195 (RG43_25665) | 31102..31248 | - | 147 | WP_349356976 | single-stranded DNA-binding protein | - |
| RG43_RS29950 | 31230..31403 | + | 174 | Protein_38 | hypothetical protein | - |
| RG43_RS29955 | 31401..31631 | - | 231 | WP_001426396 | hypothetical protein | - |
| RG43_RS27200 (RG43_25675) | 31851..31976 | - | 126 | WP_001372321 | type I toxin-antitoxin system Hok family toxin | - |
| RG43_RS29960 | 31918..32067 | - | 150 | Protein_41 | plasmid maintenance protein Mok | - |
| RG43_RS29540 (RG43_25680) | 32089..32277 | + | 189 | WP_001299721 | hypothetical protein | - |
| RG43_RS27210 (RG43_25685) | 32246..33008 | - | 763 | Protein_43 | plasmid SOS inhibition protein A | - |
| RG43_RS27215 (RG43_25690) | 33005..33439 | - | 435 | WP_000845895 | conjugation system SOS inhibitor PsiB | - |