T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 31567..57940
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RG39_RS24395 (RG39_23205) | 30933..31160 | + | 228 | WP_000450520 | toxin-antitoxin system antitoxin VapB | - |
| RG39_RS24400 (RG39_23210) | 31160..31558 | + | 399 | WP_000911313 | type II toxin-antitoxin system VapC family toxin | - |
| RG39_RS24405 (RG39_23215) | 31567..33720 | - | 2154 | WP_000009324 | type IV conjugative transfer system coupling protein TraD | virb4 |
| RG39_RS24410 (RG39_23220) | 33973..34704 | - | 732 | WP_023565183 | conjugal transfer complement resistance protein TraT | - |
| RG39_RS24415 (RG39_23225) | 34736..35233 | - | 498 | WP_000605857 | entry exclusion protein | - |
| RG39_RS24420 (RG39_23230) | 35249..38071 | - | 2823 | WP_001007018 | conjugal transfer mating-pair stabilization protein TraG | traG |
| RG39_RS24425 (RG39_23235) | 38068..39441 | - | 1374 | WP_001517790 | conjugal transfer pilus assembly protein TraH | traH |
| RG39_RS24430 (RG39_23240) | 39441..39821 | - | 381 | WP_001389370 | F-type conjugal transfer protein TrbF | - |
| RG39_RS24435 (RG39_23245) | 39808..40149 | - | 342 | WP_001443031 | P-type conjugative transfer protein TrbJ | - |
| RG39_RS24440 (RG39_23250) | 40079..40624 | - | 546 | WP_000059851 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| RG39_RS24445 (RG39_23255) | 40611..40895 | - | 285 | WP_000624109 | type-F conjugative transfer system pilin chaperone TraQ | - |
| RG39_RS24450 (RG39_23260) | 40976..41290 | + | 315 | WP_001324103 | hypothetical protein | - |
| RG39_RS24455 (RG39_23265) | 41292..41639 | - | 348 | WP_001287910 | conjugal transfer protein TrbA | - |
| RG39_RS24460 (RG39_23270) | 41655..42398 | - | 744 | WP_001030393 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| RG39_RS24465 (RG39_23275) | 42391..42648 | - | 258 | WP_000864318 | conjugal transfer protein TrbE | - |
| RG39_RS24470 (RG39_23280) | 42675..44483 | - | 1809 | WP_000821841 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| RG39_RS24475 (RG39_23285) | 44480..45118 | - | 639 | WP_000777700 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| RG39_RS24480 (RG39_23290) | 45127..46119 | - | 993 | WP_000830183 | conjugal transfer pilus assembly protein TraU | traU |
| RG39_RS24485 (RG39_23295) | 46116..46748 | - | 633 | WP_001203720 | type-F conjugative transfer system protein TraW | traW |
| RG39_RS24490 (RG39_23300) | 46745..47131 | - | 387 | WP_000099686 | type-F conjugative transfer system protein TrbI | - |
| RG39_RS24495 (RG39_23305) | 47128..49755 | - | 2628 | WP_001064245 | type IV secretion system protein TraC | virb4 |
| RG39_RS24500 (RG39_23310) | 49915..50136 | - | 222 | WP_001278689 | conjugal transfer protein TraR | - |
| RG39_RS24505 (RG39_23315) | 50271..50786 | - | 516 | WP_000809838 | type IV conjugative transfer system lipoprotein TraV | traV |
| RG39_RS24510 (RG39_23320) | 50783..51034 | - | 252 | WP_001038342 | conjugal transfer protein TrbG | - |
| RG39_RS24515 (RG39_23325) | 51046..51243 | - | 198 | WP_001324648 | conjugal transfer protein TrbD | - |
| RG39_RS24520 (RG39_23330) | 51230..51820 | - | 591 | WP_001376242 | conjugal transfer pilus-stabilizing protein TraP | - |
| RG39_RS24525 (RG39_23335) | 51810..53237 | - | 1428 | WP_000146685 | F-type conjugal transfer pilus assembly protein TraB | traB |
| RG39_RS24530 (RG39_23340) | 53237..53965 | - | 729 | WP_001230787 | type-F conjugative transfer system secretin TraK | traK |
| RG39_RS24535 (RG39_23345) | 53952..54518 | - | 567 | WP_000399792 | type IV conjugative transfer system protein TraE | traE |
| RG39_RS24540 (RG39_23350) | 54540..54851 | - | 312 | WP_000012106 | type IV conjugative transfer system protein TraL | traL |
| RG39_RS24545 (RG39_23355) | 54866..55231 | - | 366 | WP_000994779 | type IV conjugative transfer system pilin TraA | - |
| RG39_RS24550 (RG39_23360) | 55264..55659 | - | 396 | WP_001309237 | conjugal transfer relaxosome DNA-bindin protein TraY | - |
| RG39_RS24555 (RG39_23365) | 55758..56447 | - | 690 | WP_000283385 | conjugal transfer transcriptional regulator TraJ | - |
| RG39_RS24560 (RG39_23370) | 56634..57017 | - | 384 | WP_001151524 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| RG39_RS24570 (RG39_23375) | 57350..57940 | + | 591 | WP_001376243 | transglycosylase SLT domain-containing protein | virB1 |
| RG39_RS24575 (RG39_23380) | 58237..59058 | - | 822 | WP_001234426 | DUF932 domain-containing protein | - |
| RG39_RS24580 (RG39_23385) | 59176..59463 | - | 288 | WP_000107535 | hypothetical protein | - |
| RG39_RS27140 (RG39_23390) | 59488..59694 | - | 207 | WP_000547968 | hypothetical protein | - |
| RG39_RS27145 | 59764..59936 | + | 173 | Protein_73 | hypothetical protein | - |
| RG39_RS27150 | 59934..60164 | - | 231 | WP_071586998 | hypothetical protein | - |
| RG39_RS24600 (RG39_23400) | 60384..60509 | - | 126 | WP_001372321 | type I toxin-antitoxin system Hok family toxin | - |
| RG39_RS27155 | 60451..60600 | - | 150 | Protein_76 | plasmid maintenance protein Mok | - |
| RG39_RS26715 (RG39_23405) | 60622..60810 | + | 189 | WP_001299721 | hypothetical protein | - |
| RG39_RS24610 (RG39_23410) | 60779..61541 | - | 763 | Protein_78 | plasmid SOS inhibition protein A | - |
| RG39_RS24615 (RG39_23415) | 61538..61972 | - | 435 | WP_000845936 | conjugation system SOS inhibitor PsiB | - |
| RG39_RS24620 | 62027..62224 | - | 198 | Protein_80 | hypothetical protein | - |
| RG39_RS24625 (RG39_23420) | 62252..62485 | - | 234 | WP_000005987 | DUF905 family protein | - |